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GitHub topics: microsatellite

Open-Source-Satellite/Mercury-GS

An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.

Language: Python - Size: 7.13 MB - Last synced at: 5 days ago - Pushed at: almost 3 years ago - Stars: 53 - Forks: 11

lmdu/pytrf

a python package for finding tandem repeats from genomic sequences

Language: C - Size: 1.47 MB - Last synced at: 22 days ago - Pushed at: about 2 months ago - Stars: 14 - Forks: 0

zkamvar/repvar

R package to find samples that represent all variables

Language: R - Size: 2.78 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

pseudogene/qdd-docker 📦

User-friendly computer program for microsatellite selection and primer design revisited - Now in a Docker

Language: Dockerfile - Size: 5.86 KB - Last synced at: about 1 month ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

lmdu/krait

An ultrafast tool for genome-wide survey of microsatellites and primer design

Language: HTML - Size: 91.7 MB - Last synced at: 18 days ago - Pushed at: 7 months ago - Stars: 38 - Forks: 9

pranjalpruthi/bhedi

βHΞDI (Biomarker-based Heuristic Engine for Dengue Identification) is a computational tool designed for the identification of Dengue virus serotypes in wastewater next-generation sequencing data.

Language: Go - Size: 6.76 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

riosew/Mfind

MFind Software

Language: Java - Size: 16.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

kohyamat/massgenotyping

Python package for microsatellite genotyping from highly multiplexed amplicon sequencing data

Language: Python - Size: 420 KB - Last synced at: 9 months ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 1

fcunial/Revant

De novo repeat inference from long reads

Language: Java - Size: 1.22 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

schellt/msat-loci-identification

De novo microsatellite loci identification pipeline as used in Schröder et al. (2021)

Language: Perl - Size: 5.86 KB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

sravel/MLG_assign

Multi-Locus Genotypes (MLGs) are frequently used to carry out population genetics of clonal organisms. Tools to assign genotyped individuals to MLGs were integrated in some genetic software. However, these tools usually fail to appropriately deal with missing data.

Language: Python - Size: 627 KB - Last synced at: 5 days ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0