GitHub topics: monkeypox | Ecosyste.ms: Repos

OpenOmics/mpox-seek

A rapid pipeline for targeted ONT monkeypox sequencing

Language: Python - Size: 675 KB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 1 - Forks: 0

UPHL-BioNGS/Cecret

Reference-based consensus creation

Language: Nextflow - Size: 277 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 53 - Forks: 27

nextstrain/mpox

Nextstrain build for mpox virus

Language: Python - Size: 34.1 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 46 - Forks: 20

mpxv-lineages/lineage-designation

Official place for proposals and details around monkeypox virus lineage designations

Language: Python - Size: 858 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 23 - Forks: 3

This project involves creating a scalable, CRUD REST API to manage Monkeypox cases in Mexico using Node.js, TypeScript, and MongoDB. Includes email notifications with Mapbox integration, and a cron job to check for new cases every 10 seconds. The API is containerized with Docker and uses GitHub Actions for automated Docker image building.

Language: TypeScript - Size: 200 KB - Last synced at: 21 days ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0

prashantqwerty/2022-MonkeyPox

This is a 2022 MonkeyPox visualization made to spread awareness about the virus, with the following graphs~ World View of Total Cases- This shows a comparison of cases in all countries for each day. Total Aggregated- This shows the total cases and the change of total cases for each day. Total Cases vs Hospitalized patients - Tells about the healthcare system & awareness of the virus through scatter plot, fewer hospitalised patients but high cases indicate a not-so-well maintained healthcare department for the virus outbreak. Total Cases vs Suspected Patients- Tells about the healthcare prediction system & awareness of the virus through scatter plot, fewer predicted patients but high cases indicate a not-so-well maintained healthcare- statistics department for the virus outbreak. Hospitalized vs Suspected Cases- Scatter plot for suspected and hospitalized cases.

Size: 1.95 KB - Last synced at: 25 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

wf-id/us-mpx

Tracking Monkeypox Virus (MPX) infections reported in the United States

Language: R - Size: 1.85 MB - Last synced at: 12 days ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 3

TheLDB/monkeypox-api

An API & Scraper that allows quick and easy access to both country & state data for Monkeypox

Language: TypeScript - Size: 157 KB - Last synced at: 3 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1

AmirSorayaieAzar/MPD-DNN

Monkeypox detection using deep neural networks

Size: 21.5 KB - Last synced at: 11 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

wf-id/nc-mpx

Tracking reported MPX cases in North Carolina

Language: Shell - Size: 16.9 MB - Last synced at: 11 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

sequence-review/mpox

Place to discuss mpox virus sequences

Size: 2.93 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

micb25/RKI_Monkeypox

Web scraper and visualization for monkeypox cases in Germany

Language: Gnuplot - Size: 142 MB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 2

jeffbrennan/TexasPandemics 📦

Scrapes, cleans, and analyzes Texas COVID-19 data

Language: Python - Size: 5.2 GB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 3

sakinkirti/monkeypox-dashboard

Monkeypox dashboard intended for use by public health experts in the US. Created by Saketh Dendi, Felix Huang, and Sakin Kirti for CSDS393 @cwru

Language: JavaScript - Size: 5.78 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0