GitHub topics: orthology-assignments
eggnogdb/eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
Language: Python - Size: 94.9 MB - Last synced at: 14 days ago - Pushed at: 12 months ago - Stars: 611 - Forks: 108
JLSteenwyk/orthosnap
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
Language: Python - Size: 112 MB - Last synced at: 19 days ago - Pushed at: 3 months ago - Stars: 25 - Forks: 1
univieCUBE/deepnog
Protein orthologous group assignment with deep learning
Language: Python - Size: 4.51 MB - Last synced at: 14 days ago - Pushed at: 4 months ago - Stars: 26 - Forks: 8
JLSteenwyk/orthofisher
a broadly applicable tool for automated gene identification and retrieval
Language: Python - Size: 81.9 MB - Last synced at: 16 days ago - Pushed at: 5 months ago - Stars: 30 - Forks: 1
fethalen/phylopypruner
Tree-based orthology inference with functionality for reducing contamination
Language: Python - Size: 13.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 1
fethalen/orthoquoll
A stand-alone tool for evaluating simple statistics of orthologs
Language: Python - Size: 340 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0