An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: pmid

titipata/pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

Language: Python - Size: 60.4 MB - Last synced at: 4 days ago - Pushed at: 4 months ago - Stars: 643 - Forks: 171

jimmc414/onefilellm

Specify a github or local repo, github pull request, arXiv or Sci-Hub paper, Youtube transcript or documentation URL on the web and scrape into a text file and clipboard for easier LLM ingestion

Language: Python - Size: 538 KB - Last synced at: 12 days ago - Pushed at: 27 days ago - Stars: 1,073 - Forks: 100

pykong/PyperGrabber

Fetches PubMed article IDs (PMIDs) from email inbox, then crawls PubMed, Google Scholar and Sci-Hub for respective PDF files.

Language: Python - Size: 21.5 KB - Last synced at: 11 days ago - Pushed at: over 6 years ago - Stars: 34 - Forks: 7

ganemedelabs/citeease-cli

A CLI tool that generates formatted citations (references) based on various unique identifiers, including URL, DOI, ISBN, PMID, and PMCID.

Language: TypeScript - Size: 69.3 KB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 0 - Forks: 0

rougier/persid

Persistent identifier library for GNU Emacs

Language: Emacs Lisp - Size: 87.9 KB - Last synced at: 6 days ago - Pushed at: about 2 months ago - Stars: 37 - Forks: 3

ropensci/citecorp

Client for the Open Citations Corpus

Language: R - Size: 120 KB - Last synced at: 15 days ago - Pushed at: 3 months ago - Stars: 11 - Forks: 4

wcmc-its/ReCiter-Scopus-Retrieval-Tool

A tool for retrieving articles from Scopus. Can work as a standalone application or in conjunction with the author disambiguation application, ReCiter.

Language: Java - Size: 5.62 MB - Last synced at: 15 days ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 5

dvklopfenstein/pmidcite

Turbocharge a PubMed literature search rather than clicking and clicking and clicking on Google Scholar

Language: Python - Size: 22.5 MB - Last synced at: 14 days ago - Pushed at: 7 months ago - Stars: 30 - Forks: 7

ganemedelabs/citeease-chrome-extension

Automatically detects URLs, DOIs, PMIDs, PMCIDs, and ISBNs on webpages, and generates citations in your preferred style.

Language: TypeScript - Size: 444 KB - Last synced at: 30 days ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

kinleydhinata/PubMed-SyRev-Scraper

A Python tool for systematic review scraping PubMed articles based on specified search queries.

Language: Python - Size: 29.3 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

Tishacy/SciDownl

An unofficial api for downloading papers from SciHub via DOI, PMID, title

Language: Python - Size: 253 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 167 - Forks: 40

fphammerle/pubmed-bibtex 📦

Generate BibTeX Entries for PubMed Publications

Language: Python - Size: 158 KB - Last synced at: 3 days ago - Pushed at: almost 2 years ago - Stars: 8 - Forks: 0

shreyas1701/Pubmed-PMC-Parser

Language: Python - Size: 7.81 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

GarriManasaryan/article_citation_bot

A reference (citation) generating bot by PMID or DOI

Language: Python - Size: 6.84 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

ropensci-archive/rcitoid 📦

:warning: ARCHIVED :warning: Citation data via Wikimedia using the Citoid service

Language: R - Size: 51.8 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

jcvb/doi-pmid-finder

Find and validate all Doi(s), Pmid(s) on a string, returning a array of results.

Language: JavaScript - Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

MohammadHalawani/pubmed-articles-grabber

Grabs and downloads full-text versions of PubMed records in different formats.

Language: Python - Size: 31.3 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

awandahl/dromedar_diva_scopus

Language: R - Size: 51.8 KB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0