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GitHub topics: polyp-segmentation

Shadow15184/Meganet

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Language: Dockerfile - Size: 10.7 KB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 0 - Forks: 0

DengPingFan/PraNet

PraNet: Parallel Reverse Attention Network for Polyp Segmentation, MICCAI 2020 (Oral). Code using Jittor Framework is available.

Language: Python - Size: 12.9 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 496 - Forks: 127

WZH0120/SAM2-UNet

SAM2-UNet: Segment Anything 2 Makes Strong Encoder for Natural and Medical Image Segmentation

Language: Python - Size: 3.13 MB - Last synced at: 18 days ago - Pushed at: 19 days ago - Stars: 361 - Forks: 38

ai4colonoscopy/IntelliScope

Frontiers in Intelligent Colonoscopy [ColonSurvey | ColonINST | ColonGPT]

Language: Python - Size: 32.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 66 - Forks: 4

ai4colonoscopy/PraNet-V2

PraNet-V2: Upgrading PraNet from binary (V1) to multi-class (V2) segmentation . Support both Jittor & PyTorch DL frameworks.

Language: Python - Size: 2.77 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 6 - Forks: 1

fisherman611/unet-for-colonoscopy-polyp-segmentation

This repository offers an implementation of the UNet model tailored for semantic segmentation tasks, focusing on detecting polyps in colonoscopy images. It includes comprehensive training scripts, a configurable UNet architecture with an encoder such as ResNet, and a user-friendly inference script.

Language: Jupyter Notebook - Size: 328 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 0

DebeshJha/MDNet

Abdominal Organ Segmentation using Multi Decoder Network (MDNet) [Accepted at ICASSP 2025]

Language: Python - Size: 1.6 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 1

WZH0120/MoE-Polyp

[MMAsia 2024] MoE-Polyp: Shifting More Attention to Small Polyp Segmentation via Mixture-of-Experts

Size: 15.6 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0

zh320/medical-segmentation-pytorch

PyTorch implementation of medical semantic segmentations models, e.g. UNet, UNet++, DUCKNet, ResUNet, ResUNet++, and support knowledge distillation, distributed training, Optuna etc.

Language: Python - Size: 71.3 KB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 12 - Forks: 4

TimKong21/Polyp-Segmentation

Polyp segmentation tool utilizing U-Net for accurate medical image analysis, designed to enhance early detection and diagnosis of colorectal cancer. Features a user-friendly Streamlit web app for easy image processing and analysis, leveraging the Kvasir-SEG dataset for improved healthcare outcomes.

Language: Jupyter Notebook - Size: 200 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 4

GewelsJI/VPS

Official website for "Video Polyp Segmentation: A Deep Learning Perspective (MIR 2022)"

Language: Python - Size: 227 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 190 - Forks: 30

WZH0120/BMANet

Code for paper: "BMANet: Boundary-guided multi-level attention network for polyp segmentation in colonoscopy images"

Language: Python - Size: 174 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1

plemeri/UACANet

Official PyTorch implementation of UACANet: Uncertainty Augmented Context Attention for Polyp Segmentation (ACMMM 2021)

Language: Python - Size: 482 KB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 154 - Forks: 47

nikhilroxtomar/TGANet

TGANet: Text-guided attention for improved polyp segmentation [Early Accepted & Student Travel Award at MICCAI 2022]

Language: Python - Size: 1.12 MB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 73 - Forks: 10

nikhilroxtomar/TransResUNet

TransResU-Net: Transformer based ResU-Net for Real-Time Colonoscopy Polyp Segmentation

Language: Python - Size: 588 KB - Last synced at: 16 days ago - Pushed at: over 2 years ago - Stars: 24 - Forks: 8

SyntaxErr0r1/POVa

Project for Computer Vision (POVa) course at VUT FIT

Language: Jupyter Notebook - Size: 114 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

Huster-Hq/MonoBox

[AAAI 2025] MonoBox: Tightness-free Box-supervised Polyp Segmentation using Monotonicity Constraint

Language: Python - Size: 21.7 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 8 - Forks: 0

Piero24/lossFuncition-4SN

This research will show an innovative method useful in the segmentation of polyps during the screening phases of colonoscopies. To do this we have adopted a new approach which consists in merging the hybrid semantic network (HSNet) architecture model with the Reagion-wise(RW) as a loss function for the backpropagation process.

Language: Python - Size: 803 MB - Last synced at: 5 days ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

weijun-arc/SANet

Codes for MICCAI2021 paper "Shallow Attention Network for Polyp Segmentation"

Language: MATLAB - Size: 1.18 MB - Last synced at: 8 months ago - Pushed at: over 3 years ago - Stars: 57 - Forks: 7

Amir-Entezari/polyp-segmenation-unet

Polyp segmentation using U-Net in PyTorch. This project utilizes the Kvasir-SEG dataset to train and evaluate a deep learning model for accurate segmentation of polyps in endoscopic images.

Language: Jupyter Notebook - Size: 1.26 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

DebeshJha/TransRUPNet

TransRUPNet for Improved Out-of-Distribution Generalization in Polyp Segmentation (IEEE EMBC)

Language: Python - Size: 827 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0

DebeshJha/PVTFormer

CT Liver Segmentation Via PVT-based Encoding and Refined Decoding (IEEE ISBI)

Language: Python - Size: 1.38 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 10 - Forks: 2

RazvanDu/DUCK-Net

Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )

Language: Jupyter Notebook - Size: 1.04 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 61 - Forks: 18

DebeshJha/TransNetR

Official implementation of TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testing (MIDL 2022)

Language: Python - Size: 9.91 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 10 - Forks: 2

UARK-AICV/MEGANet

[WACV 2024] An implementation of MEGANet for polyp segmentation with multi-scale edge-guided attention

Language: Python - Size: 483 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 2

AjNavneet/PolypSegmentation_UNet_ColonoscopyImages

Polyp recognition and segmentation for colonoscopy images using UNet++ model.

Language: Jupyter Notebook - Size: 153 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

DebeshJha/DoubleUNet

PyTorch implementation of DoubleUNet for medical image segmentation

Language: Python - Size: 1.95 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

DebeshJha/PolypGen

A multi-centre polyp detection and segmentation dataset for generalisability assessment https://www.nature.com/articles/s41597-023-01981-y

Size: 9.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1

DebeshJha/Doubleunet_pytorch

DoubleU-Net: A Deep Convolutional Neural Network for Medical Image Segmentation (pytorch implementation)

Language: Python - Size: 838 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

DebeshJha/NanoNet

NanoNet: Real-time medical Image segmentation architecture (IEEE CBMS)

Language: Python - Size: 2.91 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 18 - Forks: 7

DebeshJha/Kvasir-SEG

Kvasir-SEG: A Segmented Polyp Dataset

Size: 648 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

JortdeJong13/epistemic-uncertainty

Epistemic uncertainty, sometimes referred to as model uncertainty, describes what the model does not know because training data was not appropriate. Modelling epistemic uncertainty is crucial to prevent ill advised discussion making due to over confident models.

Language: Jupyter Notebook - Size: 8.74 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

RisabBiswas/Polyp-SAM-PlusPlus

Polyp-SAM++ is the first text-guided polyp-segmentation method using segment anything model (SAM).

Language: Jupyter Notebook - Size: 2.72 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

krishnakaushik25/Medical-Image-Segmentation-DL

Implemented Unet++ models for medical image segmentation to detect and classify colorectal polyps.

Language: Jupyter Notebook - Size: 153 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 1

GivralNguyen/BKAI-IGH-Neopolyp-Segmentation

Baseline model for BKAI-IGH_Neopolyp. Currently supports Unet and Attention Unet with VGG-16, MobilenetV2 and Efficientnet-B0 backbone. This repository is private therefore not a official implementation from BKAI.

Language: Python - Size: 5.86 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

Basars/models 📦

Polyp Segmentation and Phase Classification from Endoscopic Images

Language: Python - Size: 1.85 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

Srinivas-Natarajan/Polyp-Segmentation

This projects uses video feeds from endoscopic procedures to identify polyps in the gastrointestinal tract and draw masks around them to aid doctors in identifying precursors of colorectal cancer.

Language: Jupyter Notebook - Size: 1.39 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

RogerLiu-98/Polyp-Segmentation

A simple research on Polyp-Segmentation

Language: Jupyter Notebook - Size: 3.89 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

Mfused07/Polyp-Segmentation-using-Majority-Voiting-FYP

Performed Medical Image Segmentation Using (UNet, DoubleUnet and ResUnetplusplus)

Language: Python - Size: 25.4 KB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 2

GewelsJI/MediaEval2020-IIAI-Med

This repo is used for MediaEval2020 Workshop (Medio Track)

Language: Python - Size: 27.4 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 0

Related Keywords
polyp-segmentation 40 medical-image-segmentation 18 colonoscopy 12 deep-learning 9 segmentation 8 unet 7 medical-image-analysis 7 pytorch 5 computer-vision 5 python 5 unet-image-segmentation 5 medical-imaging 4 tensorflow 4 u-net 4 image-segmentation 4 dataset 3 machine-learning 3 polyp 3 reverse-attention 3 opencv 3 segmentation-models 3 polyp-segmentation-task 3 polyp-detection 3 image-segmentation-tensorflow 2 medical-application 2 medical-image-processing 2 edge-guided 2 python3 2 semantic-segmentation 2 data-science 2 transformers 2 colon-cancer 2 convolutional-neural-networks 2 transformer 2 doubleunet 2 unet-pytorch 2 image-processing 1 tensorflow2 1 kvasir-seg 1 real-time-semantic-segmentation 1 residual-learning 1 address 1 ducknet-tensorflow 1 ducknet-keras 1 duck-net 1 convolutional-neural-network 1 cnn-keras 1 vision 1 cnn-for-visual-recognition 1 cnn 1 encoder-decoder-architecture 1 pvtv2 1 gastroenterology 1 pvt 1 encoder-decoder 1 transformer-architecture 1 wacv2024 1 monte-carlo-dropout 1 out-of-distribution-detection 1 uncertainty 1 variational-autoencoder 1 sam 1 segment-anything 1 albumentations 1 pytorch-unet 1 vggblock 1 attention-unet 1 deeplabv3 1 feature-extraction 1 fpn 1 kvasir 1 firebase-auth 1 keras-tensorflow 1 machine-learning-algorithms 1 opencv-python 1 resunet-architecture 1 streamlit-webapp 1 pytorch-implementation 1 data-science-bowl-2018 1 image-segmentation-pytorch 1 skin-lesion-segmentation 1 colorectal-cancer 1 polyp-dataset 1 polyp-delination 1 polyps 1 sementic-segmentation 1 capsule-endoscopy 1 lightweight-framework 1 lightweight-neural-network 1 nanonets 1 open-source-datasets 1 residual-networks 1 squeeze-and-excitation 1 dataset-creation 1 early-detection 1 early-diagnonosis 1 model-confidence 1 marine-animal-segmentation 1 mirror-detection 1 salient-object-detection 1