Ecosyste.ms: Repos

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GitHub topics: prophage-prediction

mtisza1/Cenote_Unlimited_Breadsticks

DEPRECATED: Discover divergent virus sequences, prune flanking cellular sequences, make basic report

Language: Shell - Size: 193 KB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 6 - Forks: 1

mtisza1/Cenote-Taker2

Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)

Language: Shell - Size: 62.3 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 57 - Forks: 8

enteromar/JAMIRA

a reproducible and scalable workflow for prokaryote genomic data analysis designed for the genera Enterococcus spp.

Language: Python - Size: 632 MB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

WangLab-SCSIO/Prophage_Tracer

Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment

Language: Shell - Size: 91.8 KB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 16 - Forks: 1