Ecosyste.ms: Repos

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GitHub topics: pydicom

Repositories

pydicom/pydicom

Read, modify and write DICOM files with python code

Language: Python - Size: 101 MB - Last synced: about 4 hours ago - Pushed: about 7 hours ago - Stars: 1,838 - Forks: 471

ImagingDataCommons/dicomweb-client

Python client for DICOMweb RESTful services

Language: Python - Size: 451 KB - Last synced: 1 day ago - Pushed: 4 months ago - Stars: 106 - Forks: 35

tdiprima/dicom-python

Language: Jupyter Notebook - Size: 82 KB - Last synced: 3 days ago - Pushed: 4 days ago - Stars: 0 - Forks: 0

ImagingDataCommons/highdicom

High-level DICOM abstractions for the Python programming language

Language: Python - Size: 3.76 MB - Last synced: 13 days ago - Pushed: 14 days ago - Stars: 160 - Forks: 31

pydicom/deid

best effort anonymization for medical images using python

Language: Python - Size: 88.3 MB - Last synced: 1 day ago - Pushed: 9 months ago - Stars: 135 - Forks: 41

a-parida12/pdf2dcm

Python Package for PDF to DICOM Conversion

Language: Python - Size: 1.16 MB - Last synced: 7 days ago - Pushed: 29 days ago - Stars: 20 - Forks: 4

pydicom/pynetdicom

A Python implementation of the DICOM networking protocol

Language: Python - Size: 56.8 MB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 481 - Forks: 171

qurit/rt-utils

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

Language: Python - Size: 2.31 MB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 176 - Forks: 55

AdamPiszczek/rt-struct-ct-visualization

App handles GUI creation and image processing from DICOM files. Built using the PyQt5 library, it facilitates an interface with buttons and functions

Language: HTML - Size: 1.14 MB - Last synced: 23 days ago - Pushed: 23 days ago - Stars: 0 - Forks: 0

fpaupier/cancerous_cells_scans_processing 📦

Predict survival time from PET scans

Language: Python - Size: 30.3 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 9 - Forks: 6

Dr-Machine/backend

Backend for Dr. Machine

Language: Python - Size: 87.9 KB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 1

Dr-Machine/ai_corona

Radiologist-Assistant Deep Learning Framework for COVID-19 Diagnosis in Chest CT Scans

Language: Python - Size: 15.6 KB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 0

pydicom/pylibjpeg

A Python framework for decoding JPEG images, with a focus on supporting pydicom

Language: Python - Size: 50 MB - Last synced: 26 days ago - Pushed: about 2 months ago - Stars: 43 - Forks: 5

pydicom/pylibjpeg-rle

Fast DICOM RLE plugin for pylibjpeg

Language: Python - Size: 123 KB - Last synced: 28 days ago - Pushed: 4 months ago - Stars: 5 - Forks: 3

pydicom/pylibjpeg-libjpeg

A JPEG, JPEG-LS and JPEG XT plugin for pylibjpeg

Language: Python - Size: 255 KB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 15 - Forks: 6

cutright/DVH-Analytics 📦

A DICOM Database Application for Radiation Oncology

Language: Python - Size: 39.3 MB - Last synced: 1 day ago - Pushed: over 2 years ago - Stars: 80 - Forks: 29

TankEngine-ish/Human_Organs_AI_Segmentation

AI segmentation of human organs from CT images

Language: Jupyter Notebook - Size: 2.58 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

radtorch/radtorch

Official repository for RADTorch - The Medical Imaging Machine Learning Framework

Language: Python - Size: 13.8 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 18 - Forks: 5

pydicom/pylibjpeg-openjpeg

A J2K and JP2 plugin for pylibjpeg

Language: Python - Size: 263 KB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 18 - Forks: 5

ericspod/DicomBrowser

Lightweight portable Dicom browser application

Language: Python - Size: 1.03 MB - Last synced: 22 days ago - Pushed: 5 months ago - Stars: 27 - Forks: 5

mpierangeli/PEFI-Prostate_Cancer_MRI

Trabajo desarrollado para beca PEFI 2022: Software SAURUS para visualización, análisis y generación de informes automáticos de cancer prostático a partir de imágenes de MRI

Language: Python - Size: 27.2 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0

GSTT-CSC/XNAT

Tracks general documentation, standard operating procedures (SOP) and helper scripts for XNAT.

Language: Python - Size: 2.37 MB - Last synced: 3 months ago - Pushed: 7 months ago - Stars: 12 - Forks: 0

RSIP-Vision/medio

Medical images I/O python package

Language: Python - Size: 160 KB - Last synced: 2 months ago - Pushed: over 1 year ago - Stars: 32 - Forks: 5

cwverhey/DICOMwaterequivalent

calculates water equivalent area (Aw) and water equivalent circle diameter (Dw) for CT DICOM images, per AAPM 204 and AAPM 220

Language: Python - Size: 1.16 MB - Last synced: 6 months ago - Pushed: over 2 years ago - Stars: 6 - Forks: 0

rohantuli7/MedicalImageSegmentation

DICOM image segmentation implementation

Language: Jupyter Notebook - Size: 1.93 MB - Last synced: 6 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

py-baudin/dicomstack

A `pydicom` wrapper for simple loading and handling DICOM stacks

Language: Python - Size: 10.9 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 0

gywlsdms123/DicomAnonymizerTool

Dicom Anonymized Tool

Language: Python - Size: 17.6 KB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 0

yjg30737/pyqt-dicom-viewer

DICOM file viewer powered by PyQt

Language: Python - Size: 4.63 MB - Last synced: 4 months ago - Pushed: 7 months ago - Stars: 2 - Forks: 0

labhstats/mri_sort_filter_convert

Language: Python - Size: 56.6 KB - Last synced: 7 months ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

jaimeh94/Point-Dose-Calculation_TG-43

Module tg43 in python to do a manual calculation of point dose in base of TG-43 from AAPM, in two ways: using a dcm file as input and input the data manually. Also there is a desktop app to do this more friendly.

Language: Python - Size: 61.5 KB - Last synced: 8 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 0

brykov93/DICOMServer

Поиск исследований КТ в ПАКС (Комета) по заданным критериям, их получение и отправка не сервер обработки + Программа визуализация обработанных данных

Language: Python - Size: 8.79 KB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

brykov93/DICOMLocal

Поиск файлов исследований КТ по заданным параметрам (в примере- исследования легких), их копирование и анонимизация, а так же отправка на сервер обработки и получение результатов с уведомлением по электронной почте.

Language: Python - Size: 7.81 KB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

pawelzeja098/DICOM_To_PNG

Convert dicom file to png files.

Language: Python - Size: 717 KB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

pyb0924/MyPACS

MyPACS

Language: C# - Size: 3.57 MB - Last synced: 8 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 4

cutright/DVHA-DICOM-Editor 📦

Simple DICOM tag editor built with wxPython and pydicom

Language: Python - Size: 1.21 MB - Last synced: 16 days ago - Pushed: about 3 years ago - Stars: 12 - Forks: 5

amaljova/DicomDatabase

This script reads DICOM files in a source directory or in a list of source directories and searches for the patients in the given patients' list creates a DICOM DataBase in the destination directory, copies the files, and creates a DicomDataBase.csv file and a summary.txt file.

Language: Python - Size: 1.95 KB - Last synced: 9 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 0

SylwiaNowakowska/Pneumonia_Detection_from_Chest_X_rays

Classification of chest X-rays as pneumonia positive or negative with the use of convolutional neural networks based on DenseNet121.

Language: Jupyter Notebook - Size: 31.3 MB - Last synced: 10 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 1

SylwiaNowakowska/Hippocampus_Segmentation_for_Alzheimer-s_Progression Fork of udacity/nd320-c3-3d-imaging-starter

U-Net algorithm for segmentation of Hippocampus from MRI brain scans for quantification of Alzheimer's Disease Progression.

Language: Jupyter Notebook - Size: 176 MB - Last synced: 10 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

pydicom/dicom-database

a Dockerized storage and send/receiver for dicom images, intended to easily work with pydicom/dicom-datasets

Language: CSS - Size: 5.02 MB - Last synced: 10 months ago - Pushed: almost 7 years ago - Stars: 13 - Forks: 7

chris201706/PyEQD2

Convert DICOM-RT dose matrices to EQD2 via Python

Language: Python - Size: 254 KB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 12 - Forks: 5

ctsit/polyjuice Fork of naomidb/polyjuice

Anonymize dicom files

Language: Python - Size: 91.8 MB - Last synced: 10 months ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 2

JeisonPacateque/Asphalt-Mixtures-Aging-Simulator

This project performs a 3D reconstruction of a cylindrical asphalt mixture sample from a set images on a Dicom file format. The components of asphalt mixture will be identified through 3-phase segmentation. Additionally, a 3D model of the asphalt mixture reconstruction was developed. The project was implemented on the Python programming language using the open-source libraries Numpy, Scipy, Pydicom, Scikit-learn, Matplotlib and Mayavi. A simulation of the asphalt mixtures aging process is implemented using numerical methods on the mechanical, themical and chemical fields.

Language: Python - Size: 750 KB - Last synced: 9 months ago - Pushed: over 6 years ago - Stars: 2 - Forks: 3

pydicom/contrib-pydicom

contributions to the core pydicom base, including tutorials, extra plugins, etc.

Language: Python - Size: 84 KB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 50 - Forks: 55

JacobJ215/Pneumonia-Classification

Developed and evaluated two models, to detect pneumonia cases from medical images. The custom resnet18 outperformed the custom classifier with an 81% accuracy, 66% precision, and 78% recall. Valuable for timely detection of pneumonia patients, improving outcomes, and reducing mortality. CAM visualizations provide

Language: Jupyter Notebook - Size: 5.75 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0