GitHub topics: raw-nanopore-signal-analysis
CMU-SAFARI/RawHash
RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genomes) in real-time without basecalling. Described by Firtina et al. (published at https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440).
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Related Keywords
bioinformatics
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contamination
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event-detection
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genome-analysis
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hash-tables
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nanopore
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nanopore-analysis-pipeline
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nanopore-data
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nanopore-minion
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nanopore-reads
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nanopore-sequencing
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raw-nanopore-signal-analysis
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raw-signal
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rawhash
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read-mapping
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relative-abundances
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seeding
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segmentation
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