GitHub topics: reproducible-analysis
leipzig/awesome-reproducible-research
A curated list of reproducible research case studies, projects, tutorials, and media
Language: Python - Size: 1.42 MB - Last synced at: 5 days ago - Pushed at: 16 days ago - Stars: 343 - Forks: 39
Remi-Gau/eCobidas
Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist
Language: Python - Size: 5.53 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 38 - Forks: 24
gpoore/codebraid
Live code in Pandoc Markdown
Language: Python - Size: 749 KB - Last synced at: 7 days ago - Pushed at: over 1 year ago - Stars: 385 - Forks: 13
nuest/sensebox-binder
A reproducible analysis of environmental data - from hardware to plot
Language: Jupyter Notebook - Size: 1.97 MB - Last synced at: about 1 month ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 1
pythonhealthdatascience/rap_template_r_des
Template reproducible analytical pipeline (RAP) for simple R discrete-event simulation (DES) model.
Language: R - Size: 68.4 MB - Last synced at: 29 days ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 1
pythonhealthdatascience/rap_des
Documentation supporting template reproducible analytical pipelines (RAP) for simple python and R discrete-event simulation (DES) models.
Size: 60.6 MB - Last synced at: 5 days ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
aschetti/ReproHack2019Leiden
Reproducing the results reported in a preprint during ReproHack2019 (Leiden).
Language: HTML - Size: 3.14 MB - Last synced at: 12 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
holmesjoli/archiveR
An R package for data archiving and linking with code
Language: R - Size: 205 KB - Last synced at: 5 months ago - Pushed at: about 6 years ago - Stars: 2 - Forks: 0
XSLiuLab/tumor-immunogenicity-score
TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
Language: R - Size: 306 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 29 - Forks: 14
lemid/epidemioR
Epidemiologia de Doenças de Plantas Aplicada com R
Language: TeX - Size: 40.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 2
holmesjoli/utilsPy 📦
Python utility functions
Language: Python - Size: 29.3 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
smu160/PvsNP
a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.
Language: Python - Size: 102 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 9 - Forks: 2
Nelson-Gon/pycite
Python Citations Generator
Language: Python - Size: 151 KB - Last synced at: 23 days ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 3
rhodesch/project-oriented-workflow
Reproducible analysis with R, Python and Snakemake via Conda
Language: Shell - Size: 211 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0
sk-sahu/PGRB
Practical Guide to Reproducibility in Bioinformatics (Work In Progress)
Language: Nextflow - Size: 9.95 MB - Last synced at: 27 days ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0
rosalieb/AltStableStates
Seeking alternative stable states in a deep lake (Bruel et al 2018) — reproduce analysis.
Language: R - Size: 17.6 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 0
holmesjoli/utilsR
R utility functions
Language: R - Size: 186 KB - Last synced at: 5 months ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0
ccoolbaugh/SciRep-Coolbaugh-2019
Code and data to recreate figures and analyses for our Scientific Reports paper "Cold exposure induces dynamic, heterogeneous alterations in human brown adipose tissue lipid content".
Size: 576 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0
holmesjoli/ProgrammerKnowledgeBase
A bookdown project of best programmer practices for intermediate R and Python programmers
Language: HTML - Size: 3.11 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
holmesjoli/archivePy
A Python package for data archiving and linking with code
Language: Python - Size: 48.8 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0
maribelacosta/dief-notebooks
Jupyter Notebooks to reproduce analysis with dief R package
Language: Jupyter Notebook - Size: 181 KB - Last synced at: 3 months ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
