GitHub topics: sra-data
pepkit/geofetch
Builds a PEP from SRA or GEO accessions
Language: Python - Size: 965 KB - Last synced at: 1 day ago - Pushed at: 7 months ago - Stars: 49 - Forks: 5
cparsania/FungiExpresZ
An R-shiny package to analyse and visualise fungal gene expression data
Language: R - Size: 335 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 9 - Forks: 0
Louise-la/RNA_seq_alignment_pipeline
RNA-Seq Pipeline for processing paired-end FASTQ transcripts generated from Illumina sequencing. The pipeline trims adapter sequences, aligns transcripts to a specified region of interest on the reference genome, and facilitates downstream analysis.
Language: Python - Size: 13.7 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
yodeng/srautils
fast utils for fetch and dump NCBI SRA archive raw data
Language: Python - Size: 23.4 KB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0
JotaKas/hmdb_scripts Fork of tmdb-team/tmdb
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Language: Python - Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
