GitHub topics: tree-sequences

Population-scale Ancestral Recombination Graph (ARG) library

Language: Python - Size: 19.2 MB - Last synced at: about 12 hours ago - Pushed at: about 13 hours ago - Stars: 163 - Forks: 77

Rust bindings for the tskit library

Language: C - Size: 3.12 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 16 - Forks: 5

Forward-time simulation in Python using fwdpp

Language: C++ - Size: 32 MB - Last synced at: about 1 month ago - Pushed at: about 2 months ago - Stars: 30 - Forks: 6

Genome-wide genotype imputation using tree sequences.

Language: Jupyter Notebook - Size: 1.83 MB - Last synced at: 9 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

Quantitative trait simulation for ARGs

Language: Python - Size: 1.65 MB - Last synced at: 28 days ago - Pushed at: 3 months ago - Stars: 8 - Forks: 6

Forward time simulation, rust, and tree sequences.

Language: Rust - Size: 379 KB - Last synced at: 11 days ago - Pushed at: 5 months ago - Stars: 4 - Forks: 0

Calculate IBD segments from tree sequence using tskit C API

Language: C++ - Size: 7.27 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 0

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