conservation | Topic | Ecosyste.ms: Repos

Topic: "conservation"

microsoft/CameraTraps

PyTorch Wildlife: a Collaborative Deep Learning Framework for Conservation.

Language: Python - Size: 486 MB - Last synced at: 2 days ago - Pushed at: 19 days ago - Stars: 916 - Forks: 269

susam/tucl

The first-ever paper on the Unix shell written by Ken Thompson in 1976 scanned, transcribed, and redistributed with permission

Language: Makefile - Size: 4.4 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 365 - Forks: 22

VIAME/VIAME

Video and Image Analytics for Multiple Environments

Language: Python - Size: 49.6 MB - Last synced at: 2 days ago - Pushed at: 6 days ago - Stars: 308 - Forks: 84

microsoft/aerial_wildlife_detection

Tools for detecting wildlife in aerial images using active learning

Language: Python - Size: 33.5 MB - Last synced at: 5 days ago - Pushed at: 12 months ago - Stars: 236 - Forks: 56

agentmorris/MegaDetector

MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.

Language: Jupyter Notebook - Size: 186 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 173 - Forks: 35

agentmorris/camera-trap-ml-survey

Everything I know about machine learning and camera traps.

Size: 114 MB - Last synced at: 10 days ago - Pushed at: 12 days ago - Stars: 152 - Forks: 11

PetervanLunteren/AddaxAI

Simplify camera trap image analysis with AI species recognition models based around the MegaDetector model

Language: Python - Size: 127 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 145 - Forks: 23

drivendataorg/zamba

A Python package for identifying hundreds of kinds of animals, training custom models, and estimating distance from camera trap videos and images

Language: Python - Size: 83.4 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 135 - Forks: 31

prioritizr/prioritizr

Systematic conservation prioritization in R

Language: R - Size: 176 MB - Last synced at: 2 days ago - Pushed at: 8 days ago - Stars: 128 - Forks: 26

WildMeOrg/Wildbook

Wild Me's first product, Wildbook supports researchers by allowing collaboration across the globe and automation of photo ID matching

Language: Java - Size: 845 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 120 - Forks: 85

ConservationInternational/trends.earth

trends.earth - measure land change

Language: Python - Size: 157 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 115 - Forks: 48

jeffreyevans/spatialEco

R package for spatial analysis and modelling of ecological systems

Language: R - Size: 15.7 MB - Last synced at: 3 days ago - Pushed at: 5 months ago - Stars: 111 - Forks: 30

microsoft/SpeciesClassification

To gain access, please finish setting up this repository now at: https://repos.opensource.microsoft.com/microsoft/wizard?existingreponame=SpeciesClassification&existingrepoid=169153301

Language: Jupyter Notebook - Size: 9.51 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 103 - Forks: 53

OneZoom/OZtree

OneZoom Tree of Life Explorer

Language: HTML - Size: 333 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 101 - Forks: 21

diegozea/MIToS.jl

A Julia package to analyze protein sequences, structures, and evolutionary information

Language: Julia - Size: 60.8 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 82 - Forks: 17

wildflowai/platform

Model natural ecosystems 🌎🪸🐳

Language: JavaScript - Size: 1.01 MB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 75 - Forks: 0

ropensci/rredlist

IUCN Red List API Client

Language: R - Size: 2.42 MB - Last synced at: 2 days ago - Pushed at: 15 days ago - Stars: 54 - Forks: 16

drostlab/myTAI

Evolutionary Transcriptomics with R

Language: HTML - Size: 110 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 44 - Forks: 18

prioritizr/wdpar

Interface to the World Database on Protected Areas

Language: R - Size: 32.9 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 41 - Forks: 5

petargyurov/megadetector-gui

A desktop application that makes using MegaDetector's model easier

Language: JavaScript - Size: 3.63 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 41 - Forks: 2

bencevans/camtrap-detector

Detect Animals, Humans and Vehicles in Camera Trap Imagery. Powered by MegaDetector v5.

Language: Rust - Size: 13.2 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 39 - Forks: 1

WildEyeConservation/TrapTagger

AI-Powered Camera-Trap Image Processing

Language: Python - Size: 48.4 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 38 - Forks: 2

linkagescape/linkage-mapper

ArcGIS tools to automate mapping and prioritization of wildlife habitat corridors

Language: Python - Size: 74.4 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 37 - Forks: 12

Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of "Not Evaluated" species, for any taxon or geographic region of interest. https://iucnn.github.io/IUCNN/

Language: R - Size: 907 MB - Last synced at: 2 days ago - Pushed at: 7 months ago - Stars: 27 - Forks: 7

Restor-Foundation/tcd

Restor's ML pipeline for tree crown mapping in aerial images

Language: Python - Size: 30.1 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 26 - Forks: 2

MoBiodiv/mobr

Tools for analyzing changes in diversity across scales

Language: R - Size: 6.54 MB - Last synced at: 2 days ago - Pushed at: about 1 month ago - Stars: 24 - Forks: 18

earth-chris/earthlib-legacy

Spectral endmembers and unmixing tools for satellite land cover mapping.

Language: Jupyter Notebook - Size: 129 MB - Last synced at: 1 day ago - Pushed at: almost 2 years ago - Stars: 24 - Forks: 3

greenpill-dev-guild/green-goods Fork of greenpill-dev-guild/camp-green

Bringing biodiversity data onchain to better measure, track and reward impact on gardens with a simple PWA.

Language: TypeScript - Size: 20.1 MB - Last synced at: about 21 hours ago - Pushed at: 3 days ago - Stars: 19 - Forks: 3

timmh/distance-estimation

Distance Estimation for Estimating Animal Abundance

Language: Python - Size: 59.8 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 19 - Forks: 4

humphrem/action

Automated Camera Trapping Identification and Organization Network (ACTION)

Language: Python - Size: 1.75 MB - Last synced at: 3 months ago - Pushed at: 8 months ago - Stars: 16 - Forks: 0

zhmiao/Iterative-Human-and-Automated-Identification-of-Wildlife-Images

Pytorch implementation for "Iterative Human and Automated Identification of Wildlife Images" (Nature -Machine Intelligence, 2021)

Language: Python - Size: 3.86 MB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 16 - Forks: 3

ConservationInternational/resilienceatlas

Resilience Atlas - Evidence-based decision-making around resilience

Language: Jupyter Notebook - Size: 179 MB - Last synced at: 2 days ago - Pushed at: 15 days ago - Stars: 13 - Forks: 3

wx-ecology/BaBA

Script for Barrier Behavior Analysis (BaBA). This analysis is to detect and quantify animal movement behavior upon encountering with linear barriers (e.g. roads, fences, pipelines, rivers). Reference article: doi/10.1111/1365-2664.13806

Language: R - Size: 3.85 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 12 - Forks: 4

jendelel/PrankWebApp

Web application for protein-ligand binding sites analysis and visualization

Language: JavaScript - Size: 13.8 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 12 - Forks: 6

cbig/zonator

Utility tools for for anybody interested in using a familiar tool (R) in setting up Zonation runs and managing Zonation results.

Language: R - Size: 24.5 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 12 - Forks: 8

prioritizr/aoh

Create Area of Habitat Data

Language: R - Size: 136 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 11 - Forks: 1

William-Robert-Robertson/WildCamera

WildCamera Open Source Wildlife Camera

Language: HTML - Size: 104 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 10 - Forks: 0

jneme910/CART

Soil Data Access Web Services

Language: HTML - Size: 373 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 10 - Forks: 0

prioritizr/oppr

Prioritize conservation projects for funding

Language: R - Size: 15.9 MB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 10 - Forks: 2

prioriactions/prioriactions

Multi-action conservation planning

Language: R - Size: 39.9 MB - Last synced at: 21 days ago - Pushed at: 10 months ago - Stars: 10 - Forks: 0

ConFooBio/gmse

An R package for simulating Generalised Management Strategy Evaluation

Language: TeX - Size: 283 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 10 - Forks: 5

WildMeOrg/codex-frontend

The frontend for Codex, written in React with Material UI components. Codex is active and being used by the research community!

Language: JavaScript - Size: 23.9 MB - Last synced at: 10 months ago - Pushed at: 12 months ago - Stars: 8 - Forks: 17

SoothingMist/Embeddable-Software-for-Irrigation-Control

This project develops C++ and Python standard-language software for embedding in irrigation controllers for human-supervised fully-automated distributed systems.

Size: 23.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 7 - Forks: 1

yashchitroda/Wildlife-Conservation

🐾🌳 Wildlife conservation is essential for preserving endangered species and their habitats, ensuring a stable environment for future wildlife generations.

Language: HTML - Size: 356 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 1

No-Country/s11-20-m-typescript-react

En un mundo cada vez más consciente de la importancia de la sostenibilidad ambiental, nuestro proyecto tiene como objetivo principal impulsar la adopción de hábitos sustentables en la vida cotidiana de las personas. Creemos firmemente que pequeñas acciones diarias pueden tener un gran impacto en la preservación de nuestro planeta.

Language: TypeScript - Size: 4.51 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 0

a3r0id/california-live-cams 📦

A collection of modules to programmatically search for/download imagery from live cam feeds across the state of California.

Language: Python - Size: 131 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 7 - Forks: 1

camelot-project/camelot

Camera Trap software for data management and analysis. Designed for researchers and conservationists.

Last synced at: 3 months ago - Stars: 7 - Forks: 7

cadam00/prior3D

Toolset for 3D systematic conservation planning, conducting nested prioritization analyses across multiple depth levels and ensuring efficient resource allocation throughout the water column

Language: R - Size: 3.72 MB - Last synced at: 3 months ago - Pushed at: 6 months ago - Stars: 6 - Forks: 0

ropensci-archive/rwdpa 📦

:no_entry: ARCHIVED :no_entry: World Database of Protected Areas Client

Language: R - Size: 37.1 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 1

alexvmt/TeraiNet

TeraiNet is a species classification model focused on the Terai region in Nepal to support Bengal tiger conservation

Language: Jupyter Notebook - Size: 8.77 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 0

ManyIndividuals/ManyIndividuals

We are a global network of researchers with field sites investigating hypotheses that involve generalizing across many individuals

Language: TeX - Size: 30.7 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 5 - Forks: 1

agentmorris/usgs-geese

Code for training and evaluating a detector for the USGS Izembek goose survey dataset

Language: Python - Size: 1.41 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 0

NickJeff13/eDNA-for-MPAs

eDNA metabarcoding code for Marine Protected Area monitoring

Language: R - Size: 526 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 2

persts/IL2BB

The Image Level Label to Bounding Box (IL2BB) pipeline automates the generation of labeled bounding boxes by leveraging an organization’s previous labeling efforts.

Language: Python - Size: 2.66 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 2

TNTurnerLab/ACES

ACES is a workflow to query small sequences in a large set of genomes. It provides several outputs including BLAST results, a multiple sequence alignment file, a graphical fragment assembly file, and a phylogenetic tree file.

Language: Python - Size: 5.67 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 0

iotoffgrid/Breakneck-Ridge-Initiative

IoT solution with an open source and free to use tracking platform for high difficulty trails that observe lost hikers and higher rate of hiker injuries. Making the trails safer and rescues easier while preserving the nature as it is.

Size: 57.6 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 0

RobotZwrrl/OtterForceOne

Robotic urchin harvesting to protect kelp forests

Language: C++ - Size: 31.7 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 0

jendelel/calc_protein_conservation

This script computes conservation score per aminoacid for a protein.

Language: Perl - Size: 23.4 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 5 - Forks: 4

WildEyeConservation/Detweb

AI Aerial-Census Software

Language: TypeScript - Size: 225 MB - Last synced at: about 2 hours ago - Pushed at: about 4 hours ago - Stars: 4 - Forks: 1

Winniemambo/Carya_Analysis

Ecological niche modeling and conservation assessment of hickory trees (Carya Nutt.)

Language: R - Size: 248 KB - Last synced at: 4 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 0

valentinitnelav/bootstrapnet

R package for bootstrapping indices of bipartite ecological networks

Language: R - Size: 6.68 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 2

openkfw/mapme.protectedareas

Reproducible workflows in R for processing open geodata to create knowledge about KfW supported protected areas and conservation effectiveness.

Language: R - Size: 558 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0

Green-Digital-Guardians/.github

Green Digital Guardians

Language: Solidity - Size: 58.6 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

OH-SHOWN/ohshown-frontend Fork of Disfactory/frontend

Frontend of OH!SHOWN 野生動物出沒痕跡通報系統 ohshown.site . Built with Vue.js. For backend please checkout https://github.com/OH-SHOWN/ohshown-backend

Language: Vue - Size: 10.3 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 7

USAvian/USAvian

Leveraging informatics to support bird conservation delivery. An infoscape of bird conservation science and delivery.

Language: R - Size: 88.4 MB - Last synced at: 9 days ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 0

jeffreyhanson/genetic-surrogates

Data, code, and results for a research paper investigating surrogates for genetic data in conservation planning

Language: TeX - Size: 490 MB - Last synced at: 4 months ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 0

timcdlucas/RandEM

Random Encounter Modelling in R

Language: R - Size: 377 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 4 - Forks: 2

egouldo/ReproEcoDecisions

Are conservation and ecological decision support tools reproducible?

Language: TeX - Size: 1.26 MB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 1

COS301-SE-2025/AI-Powered-African-Wildlife-Detection

ReturnZero presents BushBuddy: An AI-Powered African Wildlife Detection System

Language: JavaScript - Size: 233 MB - Last synced at: about 6 hours ago - Pushed at: about 7 hours ago - Stars: 3 - Forks: 0

electricmagnetic/keadatabase

Kea Database canonical monorepo. Hosting sponsored by Catalyst.

Language: JavaScript - Size: 10.1 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 1

egouldo/EcoConsPreReg

Designing, Evaluating and Testing Preregistration Templates for Ecology and Conservation

Language: HTML - Size: 19.2 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 1

cadam00/priorCON

Graph Community Detection Methods into Systematic Conservation Planning

Language: R - Size: 3.57 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0

Vizzuality/heco-invest

Technology and innovation to close the conservation finance gap in the amazon basin

Language: Jupyter Notebook - Size: 58.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

MishterBluesky/Conservation-Colab

This Google colab notebook, allows for conservation analysis of user input genes, on their local machine. It relies on the MMSeq2 introduced by https://www.nature.com/articles/s41592-022-01488-1

Language: Jupyter Notebook - Size: 3.68 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

ecohealthalliance/amphibian_trade

Documenting amphibian trade into the United States

Language: R - Size: 38.8 MB - Last synced at: 4 months ago - Pushed at: almost 2 years ago - Stars: 3 - Forks: 1

stolarczyk/BALCONY

R package: BALCONY (Better ALignment CONsensus analYsis)

Language: R - Size: 2.94 MB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 4

vffrans/iSDMdb

Code to create an integrated species distribution model database (iSDMdb)

Language: HTML - Size: 4.82 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0

davidjakubec/3DPatch

A web application for the calculation and visualization of evolutionary conservation in protein 3D structures.

Language: JavaScript - Size: 2.73 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 2

eugeneyau/Tropical-Asian-Butterfly-Distribution

Language: R - Size: 8.42 MB - Last synced at: 28 days ago - Pushed at: 28 days ago - Stars: 2 - Forks: 1

victorcazalis/victorcazalis.github.io

Victor Cazalis - Junior researcher in Conservation biology. Personal webpage

Language: HTML - Size: 38 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 2 - Forks: 8

autumnlynn/ShorebirdCollective

Code pipeline and document templates used by the Shorebird Science and Conservation Collective

Language: R - Size: 2.01 MB - Last synced at: 3 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

AmphibiaWeb/aw-assets

All downloadable material from AmphibiaWeb is organized here by website section

Size: 336 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

ConservationTranslocation/data

Collaborative Data

Language: JavaScript - Size: 22.7 MB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

cp-PYFOREST/Land-Use-Assessment

Language: HTML - Size: 5.19 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 1

OH-SHOWN/ohshown-backend Fork of Disfactory/Disfactory

OH!SHOWN 野生動物出沒痕跡通報系統

Language: Python - Size: 9.29 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 8