Topic: "function-prediction"
elttaes/Revisiting-PLMs
Exploring Evolution-aware & free protein language models as protein function predictors
Language: Python - Size: 6.55 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 41 - Forks: 9
ltnetcase/BedAnno
Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104
Language: Perl - Size: 2.79 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 18 - Forks: 5
xuehansheng/DeepMNE-CNN
[Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks
Language: Python - Size: 17.7 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 10 - Forks: 3
PombertLab/A2GB
A2GB is a pipeline that will transform the genome annotation files exported from Apollo in preparation for sequence submission to NCBI’s GenBank.
Language: Perl - Size: 2.2 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 3 - Forks: 0
vkhamesi/proteins
🧬 Fine-Tuning Large Language and Protein Models on a single T4 GPU via Distillation, Quantization and Low-Rank Adaptation to run inference on proteins functions.
Language: Jupyter Notebook - Size: 76.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
MGXlab/pvogs_function
A proof-of-concept, automated and reproducible pipeline for predicting functional associations between pVOGs.
Language: Python - Size: 909 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
JChander/DeepMiR2GO
DeepMiR2GO: Inferring Gene Ontology Function of Human MicroRNAs based on a deep multi-label classification model
Language: Python - Size: 5.93 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
daqh/hypergraph-extensions-for-biological-networks
[a.a. 23/24] V. Di Pasquale - Utilizzare i motif delle PPI network per ottenere migliori performance nell'esecuzione dei task di link-prediction e function-prediction.
Language: Python - Size: 326 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
danieljordan2/Estimation-of-a-non-linear-function
Estimation of a non-linear function using neural networks
Language: Python - Size: 27.3 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
RiboRings/StructuralAnalysis
This repo contains a structural analysis on the human granzyme B, that was written in Rmarkdown
Language: HTML - Size: 17.5 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
