Topic: "genomic-epidemiology"
indexofire/pathongs
Pathogen NGS Documentary
Size: 16.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 119 - Forks: 87
nextstrain/mpox
Nextstrain build for mpox virus
Language: Python - Size: 33.3 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 49 - Forks: 22
mpxv-lineages/lineage-designation
Official place for proposals and details around monkeypox virus lineage designations
Language: Python - Size: 858 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 23 - Forks: 3
PROBIC/mGEMS
mGEMS Genomic epidemiology with mixed samples
Language: C++ - Size: 191 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 14 - Forks: 1
laduplessis/SARS-CoV-2_Guangdong_genomic_epidemiology
Data used for analyses in "Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China" (Lu et al., Cell, 2020) https://doi.org/10.1016/j.cell.2020.04.023
Language: R - Size: 12.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 3
CoVaRR-NET/duotang
Scripts and data for the CoVaRR-Net Pillar 6 notebook
Language: HTML - Size: 12.6 GB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 2 - Forks: 2
neherlab/BA286
BA.2.86 project with Sigal lab
Language: Python - Size: 387 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 1
giffordlabcvr/RABV-GLUE
A GLUE project for Rabies Virus (RABV).
Language: JavaScript - Size: 26.9 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0
corneliusroemer/fasta_zstd_sqlite
Efficiently store FASTA sequences in sqlite compressed with sidecar zstd dictionary
Language: Python - Size: 530 KB - Last synced at: 9 days ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
laduplessis/SARS-CoV-2_Northern_California_genomic_surveillance
Data used for analyses in "Genomic Surveillance Reveals Multiple Introductions of SARS-CoV-2 into Northern California" (Deng et al., Science, 2020) https://doi.org/10.1126/science.abb9263
Language: Python - Size: 354 KB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 2 - Forks: 1
BCCDC-PHL/plasmid-screen
Screen plasmids for carbapenemase resistance genes, and classify using MOB Suite
Language: Python - Size: 104 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 0
BCCDC-PHL/auto-ncov
Automated genomic analysis of SARS-CoV-2 sequence data
Language: Python - Size: 2.75 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0
genomesurveillance/buqingyi_sciencewebsite
Dr. Buqing Yi
Size: 166 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
BCCDC-PHL/civet Fork of artic-network/civet
Cluster Investigation & Virus Epidemiology Tool
Size: 43.2 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
amcrisan/gevit_gallery_v2
Gallery for GEViT Project
Language: HTML - Size: 6.14 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1
