BiologyTools/BioImager

A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.

Language: C# - Size: 73.5 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 17 - Forks: 5

BiologyTools/BioGTK

A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.

Language: C# - Size: 146 MB - Last synced at: 1 day ago - Pushed at: 4 months ago - Stars: 13 - Forks: 2

eadf/libstacker.rs

Image stacker based on OpenCV-rust

Language: Rust - Size: 64.5 KB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 5 - Forks: 2

woeishi/VVVV.DX11.Player

VVVV node for high performance playback of image stacks in dx11

Language: C# - Size: 27.3 KB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 1

sRassmann/canny3d-thresholder

ImageJ plugin to preform image binarization based on a canny edge detection in 3 dimensions

Language: Java - Size: 129 KB - Last synced at: almost 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 1

DACUS1995/image-stacker

Language: Python - Size: 6.39 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

AnhMinhDo/SMPBasedMax

Fiji Plugin for MIP-based Smooth Manifold Projection

Language: Java - Size: 4.31 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

Peter-T-Ruehr/stack_cropping

ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.

Language: ImageJ Macro - Size: 95.7 KB - Last synced at: 2 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1

hansenjn/ExtractSharpestPlane_JNH

ExtractSharpestPlane_JNH is an ImageJ/FIJI plugin to automatically extract the sharpest plane by highest SD from image stacks for large data sets.

Language: Java - Size: 56.6 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

Peter-T-Ruehr/checkpoint_converter

Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.

Language: ImageJ Macro - Size: 28.3 KB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1

mmohn/SER_Reader

ImageJ reader plugin for TIA (Emispec) .ser image files

Language: Java - Size: 20.5 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0