Topic: "imagej2"
knime-ip/knip
KNIME Image Processing Extension
Language: Java - Size: 212 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 50 - Forks: 11
morphonets/SNT Fork of fiji/SNT
The ImageJ framework for quantification of neuronal anatomy
Language: Java - Size: 48 MB - Last synced at: 3 days ago - Pushed at: 7 days ago - Stars: 48 - Forks: 17
DylanMuir/ReadImageJROI
Matlab function to import ROIs from ImageJ
Language: MATLAB - Size: 8.79 KB - Last synced at: 18 days ago - Pushed at: over 5 years ago - Stars: 27 - Forks: 6
tferr/Scripts
:microscope::cocktail: Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
Language: Java - Size: 9.49 MB - Last synced at: 15 days ago - Pushed at: almost 3 years ago - Stars: 25 - Forks: 18
himsr-lab/CU-CellSeg
Cell segmentation of multi-channel images
Language: ImageJ Macro - Size: 201 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 0
hadim/mm_scripts
A collection of scripts related to Micro-Manager.
Language: Shell - Size: 13.7 KB - Last synced at: 3 days ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 4
morphonets/cx3d
The Cx3D modeling framework in SciView and SNT
Language: Java - Size: 2.97 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 1
imcf/python-micrometa
:coffee: :snake: :microscope: Package for processing metadata from various light-microscopy related data formats.
Language: Python - Size: 178 KB - Last synced at: 10 days ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0
himsr-lab/CU-IScore
IHC scoring of multi-channel images
Language: ImageJ Macro - Size: 43.4 MB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
imcf/jython-scijava-logging
:snake::coffee::bookmark_tabs: Jython package for using SciJava's LogService for logging.
Language: Python - Size: 47.9 KB - Last synced at: 10 days ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
ybajaj-29/StarDist_cmd
Command-line based, automatic image analysis pipeline to evaluate the bactericidal efficacy of polymer surface coatings against E. coli.
Size: 29.2 MB - Last synced at: 9 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
kmader/spark-scifio
A Spark-interface for the io.scif and other libraries to take advantage of the ImageJ2 ecosystem.
Language: Scala - Size: 52.7 KB - Last synced at: 6 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 2
h39s/VessCoopJ
ImageJ Plugin for Automated Cancer Cell Vessel Co-option Analysis
Language: Java - Size: 8.79 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
himsr-lab/CU-MacroLibrary
ImageJ2 macro library with variables and functions
Size: 112 KB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
fmeyenhofer/NanoZoomer-J
ImageJ plugin for handling NDPI files.
Language: Java - Size: 27.3 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
berdal84/Mageek-Java
Mageek is an ImageJ Java plugin to batch process microscope images
Language: Java - Size: 262 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
nxsaken/whiplugin
Wound Healing Assay Plugin for FIJI/ImageJ
Language: Java - Size: 388 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
imcf/jython-ome-model
:coffee: :snake: :microscope: :bookmark: :bookmark_tabs: A mavenized package of the Open Microscopy Environment "ome-model" Python module to be used in ImageJ2.
Language: Python - Size: 5.86 KB - Last synced at: 2 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
jdebes/image-segmentation-imagej-plugin
ImageJ plugin containing a collection image segmentation algorithms.
Language: Java - Size: 24.4 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
4QuantOSS/scijava-jupyter-kernel Fork of scijava/scijava-jupyter-kernel
Write SciJava scripts in Jupyter notebook!
Language: Java - Size: 3.22 MB - Last synced at: 9 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1
