radiomics-feature-extraction | Topic

Topic: "radiomics-feature-extraction"

AIM-Harvard/pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

Language: Jupyter Notebook - Size: 53.3 MB - Last synced at: 6 days ago - Pushed at: 3 months ago - Stars: 1,232 - Forks: 516

hdclark/DICOMautomaton

A multipurpose tool for medical physics.

Language: C++ - Size: 182 MB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 77 - Forks: 24

JZK00/Radiomics-Features-Extractor

Hand-crafted radiomics and deep learning-based radiomcis features extraction.

Language: Python - Size: 28.7 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 60 - Forks: 16

nadeemlab/CIR

Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]

Language: Python - Size: 2.06 MB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 30 - Forks: 6

MedPhysUL/delia

DICOM Extraction for Large-scale Image Analysis (DELIA).

Language: Python - Size: 12.9 MB - Last synced at: 17 days ago - Pushed at: 3 months ago - Stars: 17 - Forks: 4

Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by measuring entropy of co-occurrences of voxel-level gradient orientations on imaging computed within a local neighborhood.

Language: Python - Size: 2.83 MB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 17 - Forks: 11

rmsandu/segmentation-eval

Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.

Language: Python - Size: 1.44 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 5

radxtools/topology-radiomics

Python implementation of topology descriptors which capture subtle sharpness and curvature differences along the surface of diseased pathologies on imaging.

Language: Python - Size: 134 MB - Last synced at: 20 days ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 3

MahdiAll99/MEDimage

Python Open-source package for medical images processing and radiomics features extraction.

Language: Jupyter Notebook - Size: 46.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 8 - Forks: 6

viswanath-lab/RADISTAT

Reference MATLAB and Python implementations of the RADISTAT algorithm

Language: Jupyter Notebook - Size: 36.6 MB - Last synced at: 8 days ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 1

lorinanthony/SECT

Code to Implement the Smooth Euler Characteristic Transform (SECT)

Language: R - Size: 27.6 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 6 - Forks: 2

viswanath-lab/BrIC_Code

Language: MATLAB - Size: 22.9 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 2

MEDomics-UdeS/MEDimage

Python Open-source package for medical images processing and radiomics features extraction.

Language: Jupyter Notebook - Size: 44.1 MB - Last synced at: 6 days ago - Pushed at: 2 months ago - Stars: 5 - Forks: 0

nssharmaofficial/nn-from-scratch

Classification of spondylodiscitidis vs metastasis in the spine using Neural Networks

Language: Python - Size: 2.41 MB - Last synced at: 22 days ago - Pushed at: 8 months ago - Stars: 4 - Forks: 1

viswanath-lab/CoLlAGeSlicerExtension 📦

3D Slicer Extension Implementation the CoLlAGe radiomics descriptor

Language: C++ - Size: 2.18 MB - Last synced at: 8 days ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 1

amaljova/DICOM-Radiomics

Helpful scripts for radiomics researchers. Collect all the DICOM metadata into .csv and .pkl files which can be used to scrutinize/ inspect your data. Crate an organized DICOM directory from an existing folder. Automatically extract radiomic features from a directory of DICOM files.

Language: Python - Size: 30.3 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0