Topic: "sbml-simulation"
opencobra/cobrapy
COBRApy is a package for constraint-based modeling of metabolic networks.
Language: Python - Size: 60 MB - Last synced at: 29 days ago - Pushed at: about 1 month ago - Stars: 520 - Forks: 228
sys-bio/roadrunner Fork of AndySomogyi/sbmlsolver
libRoadRunner: A high-performance SBML simulator
Language: C++ - Size: 274 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 54 - Forks: 28
COBREXA/COBREXA.jl
COnstraint Based Reconstruction and EXascale Analysis (in Julia)
Language: Julia - Size: 9.85 MB - Last synced at: 10 days ago - Pushed at: about 2 months ago - Stars: 15 - Forks: 1
libsbmlsim/libsbmlsim
LibSBMLSim: A library for simulating SBML models
Language: C - Size: 33.6 MB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 13 - Forks: 7
klamt-lab/COBRA-k
A Python package for "classic" Constraint-Based Reconstruction and Analysis (COBRA) and the new COBRA with kinetics (COBRA-k). Link to documentation:
Language: Python - Size: 234 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 7 - Forks: 2
matthiaskoenig/sbmlsim
sbmlsim: SBML simulation made easy
Language: HTML - Size: 61 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 5 - Forks: 4
libsbmlsim/libsbmlsim-v2
LibSBMLSim: A library for simulating SBML models (Version 2)
Language: HTML - Size: 291 KB - Last synced at: over 2 years ago - Pushed at: almost 6 years ago - Stars: 4 - Forks: 5
draeger-lab/VisSim
Easily usable JavaFx-based inSilico module for dynamic Systems Biology Markup Language (SBML) model simulation visualization. Provides an intuitive Graphical User Interface for dynamic processing based on SBSCL.
Language: Java - Size: 34.2 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1
fbergmann/pyodide-copasi
Vue3 Project using Pyodide / basico and python-copasi emscripten
Language: CSS - Size: 3.65 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
tonyxwz/pyADAPT
Analysis of Dynamic Adaptations in Parameter Trajectories
Language: Jupyter Notebook - Size: 9.66 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
