zhanghao-njmu/SCP

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

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Dragonmasterx87/Interactive-3D-Plotting-in-Seurat-3.0.0

This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data

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JGASmits/AnanseSeurat

Single cell ANANSE Gene-regulatory-network analysis from Seurat objects

Language: R - Size: 620 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 3

kpatel427/multiome_analysis

Scripts for sincle cell multiome analysis

Language: R - Size: 37.1 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 7 - Forks: 1

kullrich/scTEI

add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects

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bixBeta/scRNA-WS24

Exercises for scRNA-seq Workshop TREX x BioHPC 2024.

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OlivierRaineteauSBRI/scRNASeq

Repo linked to our recent publication in Science Advances

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kreindata/simple-seurat

Simplifying Seurat data processing, clustering, and analysis

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fmbetul/bioinfotools

R package providing essential bioinformatics tools for the analysis and visualization of scRNA-seq data.

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Kur1sutaru/wrapper_factory

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fmbetul/datacleaning

R toolkit designed to enhance the process of cleaning up and visualizing clusters within a Seurat object, commonly used for scRNA-seq data analysis.

Language: R - Size: 14 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

genepattern/Seurat.IntegrateData

GenePattern module which implements the batch correction algorithm within Seurat.

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ngshasan/scRNA-marker-gene-Annotation

scRNA-marker-gene-Annotation.

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dmalzl/yoRISC

A bit of code to interconvert objects between the Seurat and RISC environments for scRNA-seq data analysis

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