Topic: "scrna-pipeline"
zhanghao-njmu/SCP
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
Language: R - Size: 788 MB - Last synced at: 10 months ago - Pushed at: 11 months ago - Stars: 315 - Forks: 66
AntonioDeFalco/SCEVAN
R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.
Language: HTML - Size: 63 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 100 - Forks: 25
mckellardw/scMuscle
The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data
Language: HTML - Size: 96.2 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 2
luglilab/SP025_Analysis
Integration analysis with Scanpy and scRNAseq TME from blueprint
Language: Jupyter Notebook - Size: 256 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0
OlivierRaineteauSBRI/scRNASeq
Repo linked to our recent publication in Science Advances
Language: HTML - Size: 5.66 GB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
