Topic: "structural-variation-calling"
micahvista/MAMnet
MAMnet uses a deep learning network to call genetic variants from third generation DNA sequencing data.
Language: Python - Size: 10.5 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 6 - Forks: 1
assane-mbodj/dupfinder
DupFinder: A tools to detect the duplicated genes using Illumina and Nanopore sequencing data
Language: Nextflow - Size: 8.14 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 0
CarolinaPB/population-structural-var-calling-smoove
population structural variant calling with smoove
Language: Python - Size: 1.84 MB - Last synced at: 4 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 3
jasonwong-lab/smk_sv
A snakemake pipeline to call structure variants from ONT data
Language: Python - Size: 4.33 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 2 - Forks: 0
laura-budurlean/Structural_Variant_Discovery
A combination of optical genome mapping with Bionano and whole genome sequencing short-read data. This pipeline was created to help integrate structural variant calling from these two technologies.
Language: Shell - Size: 15.9 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
jiadong324/ComparStra-Parser
Scripts used to compare SVs detected from long read and long read assembly
Language: Python - Size: 134 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
