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GitHub / MBeyens / pyAmpli
pyAmpli: an amplicon-based variant filter pipeline for targeted enriched resequencing data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MBeyens%2FpyAmpli
Stars: 0
Forks: 0
Open Issues: 2
License: gpl-3.0
Language: Python
Repo Size: 78.1 KB
Dependencies:
4
Created: about 7 years ago
Updated: over 1 year ago
Last pushed: over 1 year ago
Last synced: 7 months ago
Topics: amplicons, bioinformatics, genomics, germline, haloplex, mips, ngs, ngstools, somatic-variants, targeted-sequencing, variant-filtration, variants
Files
Dependencies
- pysam ==0.8.4
- pyvcf ==0.6.8
- pyyaml ==3.11
- setuptools *