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GitHub / chgibb / PHAT

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/chgibb%2FPHAT

Stars: 17
Forks: 2
Open Issues: 76

License: gpl-3.0
Language: TypeScript
Repo Size: 649 MB
Dependencies: 1,359

Created: over 7 years ago
Updated: 4 months ago
Last pushed: over 1 year ago
Last synced: 4 months ago

Topics: alignment, analysis, bam, bam-files, bioinformatics, bioinformatics-analysis, bioinformatics-tool, circos, circos-graphs, circos-plot, dna, electron, host, next-generation-sequencing, ngs, pathogen, phat, quality-control, snps, visualization

Files

Readme

Dependencies

package.json npm

@chgibb/angularplasmid ^1.0.5 development
@chgibb/css-spinners ^2.2.1 development
@chgibb/electron-tabs ^0.8.0 development
@chgibb/ng-node-compile ^1.0.6 development
@claviska/jquery-minicolors ^2.2.6 development
@material-ui/core ^4.3.2 development
@material-ui/icons ^4.0.1 development
@material-ui/lab ^4.0.0-alpha.25 development
@types/chart.js 2.7.56 development
@types/fs-extra 0.0.37 development
@types/jest ^22.2.2 development
@types/jquery ^2.0.40 development
@types/material-ui ^0.21.6 development
@types/mkdirp ^0.3.29 development
@types/node ^8.0.17 development
@types/react ^16.8.19 development
@types/react-beautiful-dnd ^11.0.2 development
@types/react-color ^3.0.1 development
@types/react-dom ^16.0.11 development
@types/rimraf 0.0.28 development
@typescript-eslint/parser ^1.10.2 development
angular ^1.6.1 development
babel-cli ^6.26.0 development
babel-plugin-minify-constant-folding ^0.4.3 development
babel-plugin-minify-dead-code-elimination ^0.4.3 development
babel-plugin-minify-mangle-names ^0.4.3 development
babel-plugin-minify-type-constructors ^0.4.3 development
babel-plugin-search-and-replace ^1.0.0 development
babel-plugin-transform-node-env-inline ^0.4.3 development
bootstrap 4.3.1 development
browserify ^13.1.0 development
builtin-modules ^3.1.0 development
bundle-collapser ^1.2.1 development
chart.js 2.8.0 development
chartjs-plugin-annotation ^0.5.7 development
clooneyjs ^0.7.0 development
csx ^9.0.0 development
delete-empty ^1.0.1 development
dialogs ^1.1.19 development
dragula ^3.7.2 development
electron ^3.1.13 development
electron-builder ^19.8.0 development
electron-ipc-stream ^0.2.0 development
electron-packager 8.7.2 development
electron-squirrel-startup ^1.0.0 development
electron-winstaller ^2.5.2 development
eslint ^5.16.0 development
eslint-plugin-import ^2.17.3 development
eslint-plugin-jsdoc ^10.0.3 development
fs-backwards-stream 0.0.0 development
fs-extra ^2.0.0 development
github-api ^3.0.0 development
github-releases ^0.3.2 development
grunt ^1.0.1 development
gunzip-maybe ^1.4.0 development
htmlparser2 ^3.9.2 development
jest ^22.4.3 development
jquery ^3.1.1 development
jsonfile ^2.4.0 development
material-table ^1.39.0 development
minimist ^1.2.0 development
mkdirp ^0.5.1 development
nwsjs ^0.2.0 development
optimize-js ^1.0.3 development
pidusage ^1.1.6 development
popper.js 1.14.4 development
protobufjs ^6.8.3 development
ps-node ^0.1.6 development
randomcolor ^0.5.4 development
react ^16.7.0 development
react-beautiful-dnd ^11.0.4 development
react-color ^2.17.3 development
react-dom ^16.7.0 development
react-draggable ^3.3.2 development
react-swipeable-views ^0.13.3 development
request ^2.85.0 development
rimraf ^2.6.1 development
rollup ^0.49.2 development
rollup-plugin-commonjs ^8.2.5 development
rollup-plugin-node-resolve ^3.0.0 development
rollup-plugin-replace ^2.2.0 development
semi ^4.0.5 development
semver ^5.3.0 development
tar-fs ^1.15.2 development
tar-stream ^1.5.2 development
tether ^1.4.0 development
tslib ^1.9.3 development
typescript ^3.2.2 development
typestyle ^2.0.1 development
uglify-es 3.3.9 development
uuid ^3.0.1 development
walk ^2.3.9 development
xml2js ^0.4.19 development

package-lock.json npm

1266 dependencies