Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / rdk / p2rank
P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rdk%2Fp2rank
Stars: 216
Forks: 32
Open Issues: 18
License: mit
Language: Groovy
Repo Size: 365 MB
Dependencies:
28
Created: over 7 years ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: about 1 month ago
Topics: binding-sites, bioinformatics, drug-discovery, groovy, java, ligand, machine-learning, mmcif, molecular-structures, p2rank, pdb, protein-ligand-docking, protein-ligand-interactions, protein-structure, protein-surface, proteins, pymol, random-forest, structural-bioinformatics, virtual-screening
Files
Dependencies
- com.github.dpaukov:combinatoricslib3 3.3.3 implementation
- com.github.luben:zstd-jni 1.5.2-3 implementation
- com.google.code.gson:gson 2.9.0 implementation
- com.google.guava:guava 31.1-jre implementation
- com.univocity:univocity-parsers 2.9.1 implementation
- commons-io:commons-io 2.11.0 implementation
- nz.ac.waikato.cms.weka:weka-dev 3.9.6 implementation
- org.apache.commons:commons-compress 1.21 implementation
- org.apache.commons:commons-csv 1.9.0 implementation
- org.apache.commons:commons-lang3 3.12.0 implementation
- org.apache.commons:commons-math3 3.6.1 implementation
- org.apache.groovy:groovy 4.0.2 implementation
- org.apache.logging.log4j:log4j-core 2.17.2 implementation
- org.apache.logging.log4j:log4j-slf4j-impl 2.17.2 implementation
- org.biojava:biojava-alignment 6.0.5 implementation
- org.biojava:biojava-core 6.0.5 implementation
- org.biojava:biojava-structure 6.0.5 implementation
- org.codehaus.gpars:gpars 1.2.1 implementation
- org.openscience.cdk:cdk-data 2.7.1 implementation
- org.openscience.cdk:cdk-qsarmolecular 2.7.1 implementation
- org.slf4j:jul-to-slf4j 1.7.36 implementation
- org.slf4j:slf4j-api 1.7.36 implementation
- org.tukaani:xz 1.9 implementation
- org.zeroturnaround:zt-zip 1.15 implementation
- junit:junit 4.13.2 testImplementation
- actions/checkout v2 composite
- actions/setup-java v2 composite
- gradle/wrapper-validation-action e6e38bacfdf1a337459f332974bb2327a31aaf4b composite