dmancilla85/java-mvn-laslo

Maven project for the bioinformatic application LoopMatcher (aka LASLO).

Language: Java - Size: 8.5 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

biojava/biojava-tutorial

:book::books:An introductory tutorial for BioJava

Language: Python - Size: 5.01 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 114 - Forks: 41

paolopavan/biojava-run

Biojava compatible module to run external biological analysis executables making abstraction of platform specific issues and wrapping to BioJava standard data structures.

Language: Java - Size: 168 MB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0

tobiasbehr/orphaned-peptide-finder

Language: Kotlin - Size: 7.69 MB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0

gabywald/BioSilico

Some ideas about Artificial Life, Creatures (game series) and Neural Networks. (Java, Latex, Perl...)

Language: Java - Size: 58.3 MB - Last synced at: 5 days ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

dmancilla85/laslo 📦

Multi-threaded application that searches for hairpin structures in cDNA / mRNA sequences (FASTA or GenBank) with specific consensus sequences in the loop.

Language: Java - Size: 6.45 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

iamazeem/ssic

Sequence Similarity and Identity Calculator (DNA + Protein)

Language: Java - Size: 1.86 MB - Last synced at: 23 days ago - Pushed at: about 4 years ago - Stars: 4 - Forks: 0

jakubpas/alignment-java

Java implementation of global alignment using a variation of Levenshteindistance. It takes first two sequences from fasta file and returns aligned sequences also in fasta format.

Language: Java - Size: 2.93 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

sbl-sdsc/biojava-notebooks

BioJava examples in Jupyter Notebooks

Language: Jupyter Notebook - Size: 217 KB - Last synced at: 7 days ago - Pushed at: over 6 years ago - Stars: 6 - Forks: 1