carpentries-incubator/git-Rstudio-course

Git Using RStudio

Language: Python - Size: 4.35 MB - Last synced: about 7 hours ago - Pushed: about 3 years ago - Stars: 3 - Forks: 5

carpentries-incubator/CarpentriesOffline_Instructor_Onboarding

Workbench version of CarpentriesOffline Instructor Onboarding

Size: 7.41 MB - Last synced: about 20 hours ago - Pushed: about 22 hours ago - Stars: 1 - Forks: 1

carpentries-incubator/fair-data-management-agriculture

FAIR Data Management for Long-term Agriculture Experiments

Size: 4.76 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 3 - Forks: 0

carpentries-incubator/scientific-metadata

Introduction to the Fundamentals of Scientific Metadata

Size: 184 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 5 - Forks: 0

carpentries-incubator/pangenomics-workshop Fork of carpentries-lab/metagenomics-workshop

Pangenomics Workshop Overview

Language: Python - Size: 71.3 MB - Last synced: 1 day ago - Pushed: 1 day ago - Stars: 2 - Forks: 2

carpentries-incubator/python-modeling-power-consumption

Modeling Time Series Data for Engineers

Size: 5.84 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 2 - Forks: 1

carpentries-incubator/workflows-nextflow

Workflow management with Nextflow and nf-core

Language: Nextflow - Size: 19.3 MB - Last synced: about 11 hours ago - Pushed: about 23 hours ago - Stars: 18 - Forks: 29

carpentries-incubator/lesson-gpu-programming

GPU Programming with Python and CUDA.

Language: R - Size: 19 MB - Last synced: 1 day ago - Pushed: 1 day ago - Stars: 18 - Forks: 11

carpentries-incubator/intro-image-classification-cnn

new lesson on image classification with convolutional neural networks

Language: Python - Size: 23.2 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 2 - Forks: 4

carpentries-incubator/machine-learning-reinforcement-python

Reinforcement learning in Python

Size: 2.37 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 0 - Forks: 1

carpentries-incubator/SDC-BIDS-dMRI

Introduction to dMRI

Language: Jupyter Notebook - Size: 41.7 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 21 - Forks: 16

carpentries-incubator/jupyter_maps

Interactive Maps in the Jupyter Notebook

Language: HTML - Size: 12.5 MB - Last synced: 6 days ago - Pushed: about 4 years ago - Stars: 6 - Forks: 6

carpentries-incubator/IoT_arduino_nano Fork of annefou/IoT_introduction

Introduction to the Internet of Things (IoT)

Language: Python - Size: 32.1 MB - Last synced: 6 days ago - Pushed: over 4 years ago - Stars: 1 - Forks: 1

baskerville-hpc/hpc-intro Fork of carpentries-incubator/hpc-intro

Repo for the Baskerville HPC Intro based on the HPC Carpentry materials (https://carpentries-incubator.github.io/hpc-intro/)

Language: Vim Snippet - Size: 60.6 MB - Last synced: 6 days ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

carpentries-incubator/machine-learning-novice-sklearn

A Carpentry style lesson on machine learning with Python and scikit-learn.

Language: Python - Size: 11.3 MB - Last synced: 6 days ago - Pushed: 16 days ago - Stars: 24 - Forks: 27

carpentries-incubator/geospatial-python

Introduction to Geospatial Raster and Vector Data with Python

Size: 85.5 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 151 - Forks: 55

carpentries-incubator/r-tidyverse-4-datasets

R and the Tidyverse for working with data

Language: R - Size: 15.7 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 1 - Forks: 6

carpentries-incubator/fair-research-software

A course on tools and practices for open, sustainable and FAIR (Findable, Accessible, Interoperable and Reusable) research software

Language: R - Size: 8.75 MB - Last synced: 20 days ago - Pushed: 21 days ago - Stars: 6 - Forks: 3

carpentries-incubator/hpc-intro

Lesson materials for an Introduction to High Performance Computing in the tradition of Software Carpentry

Language: Vim Snippet - Size: 30 MB - Last synced: 6 days ago - Pushed: 9 days ago - Stars: 132 - Forks: 125

carpentries-incubator/deep-learning-intro

Learn Deep Learning with Python

Language: Jupyter Notebook - Size: 33.4 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 28 - Forks: 36

carpentries-incubator/java-novice-inflammation

Programming with Java

Language: Python - Size: 21.5 KB - Last synced: 22 days ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

carpentries-incubator/k8s-deployment-novice

Deploying Applications on Kubernetes

Language: Python - Size: 21.5 KB - Last synced: 22 days ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

carpentries-incubator/r-geospatial-urban

Geospatial Data Carpentry with R for Urbanists

Language: HTML - Size: 235 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 2 - Forks: 8

carpentries-incubator/bioc-project

Introduction to the Bioconductor project

Language: R - Size: 11.6 MB - Last synced: 26 days ago - Pushed: 27 days ago - Stars: 17 - Forks: 15

carpentries-incubator/docker-introduction

Reproducible Computational Environments using Containers

Language: Python - Size: 2.84 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 41 - Forks: 45

carpentries-incubator/hpc-workflows

Creating HPC Workflows using Snakemake

Language: R - Size: 2.54 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 2 - Forks: 4

carpentries-incubator/bioc-intro

Bioconductor data science introduction

Language: R - Size: 730 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 28 - Forks: 27

carpentries-incubator/python-intermediate-inflammation

A template software project for use in Intermediate Research Software Development Skills In Python course. Contact: @jag1g13

Language: Python - Size: 67.4 KB - Last synced: about 4 hours ago - Pushed: about 1 month ago - Stars: 3 - Forks: 39

carpentries-incubator/julia-novice

A lesson exploring the Julia language

Language: Julia - Size: 3.92 MB - Last synced: about 20 hours ago - Pushed: about 22 hours ago - Stars: 15 - Forks: 20

carpentries-incubator/gitlab-novice

Introduction to GitLab

Size: 6.54 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

carpentries-incubator/python-text-analysis

Text Analysis with Python

Language: Python - Size: 53.1 MB - Last synced: 29 days ago - Pushed: about 2 months ago - Stars: 11 - Forks: 13

carpentries-incubator/python-testing

Python Testing and Continuous Integration

Language: Python - Size: 1.72 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 57 - Forks: 42

carpentries-incubator/lesson-parallel-python

Parallel Programming in Python

Language: Python - Size: 5.12 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 10 - Forks: 14

carpentries-incubator/python_packaging

A lesson on Python packaging and publishing, built using the Carpentries Workbench

Language: R - Size: 7.29 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 4 - Forks: 3

carpentries-incubator/machine-learning-librarians-archivists

Introduction to AI for GLAM

Language: Python - Size: 26 MB - Last synced: 20 days ago - Pushed: 29 days ago - Stars: 17 - Forks: 15

carpentries-incubator/managing-computational-projects

Managing Open and Reproducible Computational Projects

Language: R - Size: 10.4 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 8 - Forks: 10

carpentries-incubator/fair-bio-practice

FAIR in (biological) practice

Language: Jupyter Notebook - Size: 130 MB - Last synced: about 2 months ago - Pushed: 4 months ago - Stars: 8 - Forks: 12

carpentries-incubator/snakemake-novice-bioinformatics

Introduction to Snakemake for Bioinformatics

Language: Python - Size: 3.34 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 15 - Forks: 9

carpentries-incubator/pangenomics-python

https://czirion.github.io/pangenomics-python/

Language: Python - Size: 303 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1

carpentries-incubator/multidimensional-biodiversity-data

Multidimensional Biodiversity Data

Language: Python - Size: 112 KB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

carpentries-incubator/intro-to-modern-fortran

Introduction to Modern Fortran

Language: R - Size: 3.13 MB - Last synced: about 21 hours ago - Pushed: 8 days ago - Stars: 8 - Forks: 1

carpentries-incubator/SDC-BIDS-sMRI

Structural Neuroimaging Analysis in Python

Language: Jupyter Notebook - Size: 1.14 GB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 26 - Forks: 17

carpentries-incubator/SDC-BIDS-fMRI

fMRI Imaging Analysis

Language: Jupyter Notebook - Size: 40.2 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 38 - Forks: 38

carpentries-incubator/Pipeline_Training_with_Nextflow

The SMART survey team requested training to use and maintain their existing Nextflow based workflow that they are using on Pawsey/Garrawarla.

Language: HTML - Size: 5.54 MB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 1

hpc-carpentry/old-hpc-workflows 📦

Scaling studies on high-performance clusters using Snakemake workflows

Language: Python - Size: 9.84 MB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 8 - Forks: 3

carpentries-incubator/fair-for-leaders

FAIR for leaders

Language: Python - Size: 31.7 MB - Last synced: about 2 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 0

Fgazzelloni/2024-03-19-nnlm-uw-online

Library Carpentry (Regular Expressions, OpnRefine, Shell or Git, Tidy Data) workshop on 19-21 March, 2024

Language: HTML - Size: 2.1 MB - Last synced: 3 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

carpentries-incubator/genome-mining

Language: Python - Size: 11.2 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 6 - Forks: 5

acceleratingdigitalskills/ethics

Ethical and methodological essentials for music researchers using web data

Size: 3.66 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 1 - Forks: 1

carpentries-incubator/python-humanities-lesson

Python for Humanities

Size: 11.6 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 13 - Forks: 8

carpentries-incubator/genome-mining-workshop

Genome Mining Workshop Overview

Language: Python - Size: 71.4 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

carpentries-incubator/bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor

Language: R - Size: 48 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 18 - Forks: 24

carpentries-incubator/SDC-BIDS-EEG-EEGLAB

Working with EEGLAB and BIDS-EEG

Size: 14 MB - Last synced: about 21 hours ago - Pushed: about 22 hours ago - Stars: 1 - Forks: 2

carpentries-incubator/SDC-BIDS-IntroMRI

Introduction to MRI and BIDS

Language: Jupyter Notebook - Size: 23.3 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 23 - Forks: 19

carpentries-incubator/topological-data-analysis

Topological data analysis for Comparative Genomics

Language: Python - Size: 10.2 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1

carpentries-incubator/pangenomics

Pangenome Analysis in Prokaryotes Lesson

Language: Python - Size: 16.4 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 9 - Forks: 7

carpentries/instructor-training-bonus-modules

Instructor Training Bonus Modules

Size: 8.86 MB - Last synced: about 21 hours ago - Pushed: about 24 hours ago - Stars: 3 - Forks: 10

carpentries-incubator/shell-pangenomics Fork of carpentries-lab/metagenomics-shell

Introduction to the Command Line for Pangenomics

Language: Python - Size: 76.2 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 2

carpentries-incubator/quarto-project-example

Project Example for the Lesson: Introduction to Reproducible Publications with Quarto

Language: JavaScript - Size: 2.26 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 5 - Forks: 49

carpentries-incubator/reproducible-publications-quarto

Introduction to Reproducible Publications with Quarto

Language: Python - Size: 78.7 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 9 - Forks: 17

carpentries-incubator/open-climate-data-agriculture

Open Climate Data for Agricultural Science and Land Management

Size: 2.52 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 1 - Forks: 0

carpentries-incubator/data-science-ai-senior-researchers

Introduction to Data Science and AI for senior researchers

Language: Python - Size: 16.8 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 8 - Forks: 6

carpentries-incubator/singularity-introduction

An introduction to singularity

Language: Python - Size: 2.43 MB - Last synced: about 6 hours ago - Pushed: about 1 month ago - Stars: 11 - Forks: 17

carpentries-incubator/data-organisation-for-better-analysis

Data Organization in Spreadsheets to Ease Further Processing

Size: 9.27 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 1 - Forks: 0

carpentries-incubator/python-classifying-power-consumption

Clustering and Classifying Time Series Data for Engineers

Size: 4.78 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 1 - Forks: 0

carpentries-incubator/julia-data-workflow

Learn Julia workflows for data-intensive research

Language: HTML - Size: 1.58 MB - Last synced: about 5 hours ago - Pushed: over 1 year ago - Stars: 5 - Forks: 2

carpentries-incubator/shell-extras

Extra Unix Shell Material

Language: Python - Size: 1.39 MB - Last synced: about 21 hours ago - Pushed: about 2 months ago - Stars: 25 - Forks: 54

carpentries-incubator/ml4bio-workshop

Materials for a workshop introducing machine learning to biologists

Language: Jupyter Notebook - Size: 92.5 MB - Last synced: 3 months ago - Pushed: almost 2 years ago - Stars: 21 - Forks: 8

carpentries-incubator/machine-learning-novice-python

Introduction to Machine Learning with Python

Language: Python - Size: 7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 4 - Forks: 9

carpentries-incubator/intro-data-viz

a Carpentries-style lesson introducing the basics of data visualization

Size: 9.61 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 8 - Forks: 1

carpentries-incubator/r-ml-tabular-data

A Data-Carpentry-style lesson on some ML techniques in R

Language: Python - Size: 64.6 MB - Last synced: 6 months ago - Pushed: over 1 year ago - Stars: 3 - Forks: 0

carpentries-incubator/regex-novice-biology

Regular Expressions for Biologists

Language: Python - Size: 2.36 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

carpentries-incubator/high-dimensional-stats-r

High-dimensional statistics with R

Language: HTML - Size: 369 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 11 - Forks: 19

carpentries-incubator/java-intro

An Introduction to Java Programming

Size: 2.49 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 1 - Forks: 1

carpentries-incubator/cwl-novice-tutorial

Introduction to Workflows with Common Workflow Language

Language: HTML - Size: 5.24 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 11 - Forks: 21

carpentries-incubator/jekyll-pages-novice

Building Websites with Jekyll & GitHub Pages.

Language: HTML - Size: 29.7 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 16 - Forks: 20

cforgaci/r-geospatial-urban Fork of carpentries-incubator/r-geospatial-urban

Geospatial Data Carpentry with R for Urbanists

Language: R - Size: 1.58 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

carpentries-incubator/microbial-amplicon-analysis

A lesson teaching analysis of microbial amplicon data

Language: Python - Size: 104 KB - Last synced: 9 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 1

carpentries-incubator/python-interactive-data-visualizations

Creating Interactive Data Visualizations with Python

Language: Jupyter Notebook - Size: 5.5 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 5 - Forks: 7

carpentries-incubator/statistical-inference-for-biology

Statistical Inference for Biology

Language: HTML - Size: 7.61 MB - Last synced: 9 months ago - Pushed: almost 2 years ago - Stars: 3 - Forks: 6

carpentries-incubator/sql-humanities-lesson

SQL for Humanities

Language: Python - Size: 1.66 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 6 - Forks: 0

carpentries-incubator/OpenRefine-humanities-lesson

Open Refine for Humanities

Language: Python - Size: 4.83 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 4 - Forks: 1

carpentries-incubator/FAIRification-of-RNAseq-Data

FAIRification of RNAseq Data

Size: 2.02 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 0 - Forks: 0

carpentries-incubator/python-pandas-power-consumption

Data management and analytic pipelines for engineers

Language: Python - Size: 324 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 1 - Forks: 0

carpentries-incubator/lc-xml

Library Carpentry: XML - not currently maintained.

Language: HTML - Size: 2.18 MB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 7 - Forks: 2

carpentries-incubator/gap-lesson

Programming with GAP

Language: Python - Size: 2.65 MB - Last synced: 11 months ago - Pushed: about 1 year ago - Stars: 5 - Forks: 13

carpentries-incubator/R-archaeology-lesson Fork of datacarpentry/R-ecology-lesson

Data Analysis and Visualization in R for Archaologists, modified from the Data Carpentry R Workshop for Ecologists. Course site at https://carpentries-incubator.github.io/R-archaeology-lesson/

Language: R - Size: 48.2 MB - Last synced: 11 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 1

carpentries-incubator/iot-novice

An introduction to the Internet of things using a motorcontroller and sensors

Size: 12 MB - Last synced: about 21 hours ago - Pushed: about 23 hours ago - Stars: 2 - Forks: 0

carpentries-incubator/linear-mixed-models-public-health

Linear mixed effects modelling for public health

Language: Python - Size: 17.6 KB - Last synced: 11 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

carpentries-incubator/statistics-r-public-health

Statistical analysis in R for public health.

Language: Python - Size: 302 KB - Last synced: 11 months ago - Pushed: over 1 year ago - Stars: 3 - Forks: 2

carpentries-incubator/python-novice-programming-gapminder

An introduction to Python for non-programmers using inflammation data

Language: Python - Size: 3.04 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 1 - Forks: 0

carpentries-incubator/rna-seq-data-for-ml

RNA-Seq: Data Readiness for Machine Learning Applications

Language: R - Size: 47.5 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 2 - Forks: 3

carpentries-incubator/gpu-speedups

GPU Speedups in Python

Language: Python - Size: 2.25 MB - Last synced: 11 months ago - Pushed: about 4 years ago - Stars: 2 - Forks: 2

carpentries-incubator/business-analytics-r

Business Analytics in R

Language: R - Size: 2.26 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 0 - Forks: 0

carpentries-incubator/lc-litsearchr

Library Carpentry: Introduction to R and litsearchr

Language: TeX - Size: 6.66 MB - Last synced: 22 days ago - Pushed: 9 months ago - Stars: 2 - Forks: 1

carpentries-incubator/markdown-intro

Introduction to Markdown

Language: HTML - Size: 3.54 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 3 - Forks: 5

carpentries-incubator/introduction-to-conda-for-data-scientists

Introduction to Conda for (Data) Scientists

Language: Python - Size: 2.59 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 38 - Forks: 33

carpentries-incubator/sage-lesson

SageMath Software Carpentry Lesson

Language: Jupyter Notebook - Size: 1.49 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 6 - Forks: 3

carpentries-incubator/spreadsheet-humanities-lesson

Data Organization in Spreadsheets for Humanities

Language: Python - Size: 6.04 MB - Last synced: over 1 year ago - Pushed: about 4 years ago - Stars: 2 - Forks: 5

carpentries-incubator/data-harvesting-for-agriculture

Data Harvesting for Agriculture

Language: HTML - Size: 226 MB - Last synced: 10 months ago - Pushed: almost 3 years ago - Stars: 5 - Forks: 1