GitHub topics: reproducible-paper
tlnagy/Nagy_2023_SwellMigration
Code used to generate the figures for the "Neutrophils Actively Swell to Potentiate Migration" paper
Language: Julia - Size: 44.5 MB - Last synced at: 1 day ago - Pushed at: 2 days ago - Stars: 0 - Forks: 0

ReneHeim/proj_on_uav
This repository contains the code to reproduce the article (https://doi.org/10.1007/s11119-024-10133-0). The presented method allows to extract oblique and nadir viewing angles from UAV-mounted, multispectral snapshot cameras.
Language: Python - Size: 12.6 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 5 - Forks: 3

crsh/papaja
papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.
Language: HTML - Size: 16 MB - Last synced at: 15 days ago - Pushed at: 30 days ago - Stars: 672 - Forks: 136

benmarwick/rrtools
rrtools: Tools for Writing Reproducible Research in R
Language: R - Size: 4.87 MB - Last synced at: 14 days ago - Pushed at: 8 months ago - Stars: 689 - Forks: 86

Gaglia88/gsm_repro
Reproducibility experiments for Generalized Supervised Meta-blocking
Language: Python - Size: 60.8 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

nevrome/rrtools.addin
R Package - A graphical user interface for some of the main functions of Ben Marwick's rrtools package
Language: R - Size: 1.77 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 17 - Forks: 2

alan-turing-institute/TCPDBench
The Turing Change Point Detection Benchmark: An Extensive Benchmark Evaluation of Change Point Detection Algorithms on real-world data
Size: 154 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 139 - Forks: 28

carpentries-incubator/reproducible-publications-quarto
Introduction to Reproducible Publications with Quarto
Language: Python - Size: 78.7 MB - Last synced at: 2 months ago - Pushed at: 4 months ago - Stars: 17 - Forks: 26

klemenjak/nilm-papers-with-code
An archive for NILM papers with source code and other supplemental material
Size: 29.3 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 135 - Forks: 25

everhartlab/sclerotinia-366
Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"
Language: Shell - Size: 165 MB - Last synced at: 3 days ago - Pushed at: about 7 years ago - Stars: 9 - Forks: 6

zkamvar/Sudden_Oak_Death_in_Oregon_Forests
Population genetic analysis of _Phytophthora ramorum_ data from Oregon forests in Curry County
Language: HTML - Size: 179 MB - Last synced at: 1 day ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 3

karlolukic/reproducibility-of-whotracks.me-paper
This repository contains R code to reproduce Results section from the WhoTracks.me 2018 paper.
Language: HTML - Size: 28.6 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

petebachant/repro-qiu-et-al-2024
Reproducing the results of Qiu et al. (2024) "Decarbonized energy system planning with high-resolution..."
Language: Python - Size: 2.94 MB - Last synced at: 11 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

digantamisra98/Reproducibilty-Challenge-ECANET
Unofficial Implementation of ECANets (CVPR 2020) for the Reproducibility Challenge 2020.
Language: Python - Size: 78.1 MB - Last synced at: about 2 months ago - Pushed at: over 3 years ago - Stars: 31 - Forks: 2

nuest/ten-simple-rules-dockerfiles
Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science
Language: TeX - Size: 19.6 MB - Last synced at: 3 days ago - Pushed at: over 4 years ago - Stars: 65 - Forks: 15

fungenomics/NB-FOXR2
Analysis for "FOXR2 targets LHX6+/DLX+ neural lineages to drive CNS neuroblastoma" (Jessa*, De Cola*, Chandarana*, et al, Cancer Research, 2025)
Language: HTML - Size: 26.6 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

carpentries-incubator/quarto-project-example
Project Example for the Lesson: Introduction to Reproducible Publications with Quarto
Language: JavaScript - Size: 2.26 MB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 55

AaronGullickson/markdown_course_materials
Course Materials for Code Horizons Course on Creating Reproducible Reports with Quarto and R Markdown
Language: TeX - Size: 9.18 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 7 - Forks: 7

econ-ark/nbreproduce
Reproduce Jupyter Notebooks inside Docker Containers.
Language: Jupyter Notebook - Size: 626 KB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 1

nrybowski/ns3-sim
Artefacts for the paper "Evaluating OSPF Convergence with ns-3 DCE"
Language: C++ - Size: 180 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

TAOGenna/pytorch-neural-style-transfer
Reconstruction of the original paper on neural style transfer (Gatys et al.)
Language: Jupyter Notebook - Size: 20 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

alan-turing-institute/CSV_Wrangling
Repository for reproducibility of the CSV file project
Language: TeX - Size: 6.2 MB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 28 - Forks: 6

Faisalse/IntentAware_topn
This is the official repository of the paper "Are we really making much progress? An analysis of intent-aware recommendation models"
Language: Python - Size: 122 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

jeffreyhanson/raptr-manuscript
Data, code, and results for the raptr R package manuscript
Language: TeX - Size: 191 MB - Last synced at: 3 months ago - Pushed at: almost 8 years ago - Stars: 2 - Forks: 0

jeffreyhanson/genetic-surrogates
Data, code, and results for a research paper investigating surrogates for genetic data in conservation planning
Language: TeX - Size: 490 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 0

SchlossLab/Topcuoglu_ML_mBio_2020
Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data
Language: R - Size: 372 MB - Last synced at: 6 months ago - Pushed at: almost 5 years ago - Stars: 28 - Forks: 14

fungenomics/HGG-oncohistones
Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" (Jessa et al, Nature Genetics, 2022)
Language: HTML - Size: 16.6 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 7 - Forks: 2

benmarwick/1989-excavation-report-Madjedbebe
Text, data and code to accompany the analysis of the 1989 excavation data
Language: R - Size: 32.1 MB - Last synced at: about 2 months ago - Pushed at: over 7 years ago - Stars: 15 - Forks: 4

marcocosta97/grafite-experiments
An automated way to reproduce the results of the paper "Grafite: Taming Adversarial Queries with Optimal Range Filters"
Language: Shell - Size: 23.4 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

paezha/Neighborhood-Perceptions-and-Active-Travel-in-Bangladesh
Jamal, S., Mohiuddin, H., Paez, A. (2020) How do the perceptions of neighborhood conditions impact active transportation? A study in Rajshahi, Bangladesh, Transportation Research Part D: Transport and Environment, 87:102525
Language: TeX - Size: 1.57 MB - Last synced at: 3 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

computorg/template-computo-quarto
Template for submitting a manuscript with quarto (Jupyter or Rmarkdown)
Language: TeX - Size: 25.1 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 9 - Forks: 5

TomMonks/des_sharing_lit_review
Systematic scoping review paper for healthcare DES model sharing.
Language: HTML - Size: 10.4 MB - Last synced at: 20 days ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 1

cdcarrion/Marijuana-Law
El Efecto de la Legalización de la Marihuana sobre la Criminalidad en los Estados Unidos
Language: R - Size: 5.02 MB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0

acfrery/Grading-Reproducibility-in-Remote-Sensing-Articles
Position Paper for the J-STARS Special Issue on Reproducible Research in Remote Sensing
Language: TeX - Size: 8.43 MB - Last synced at: 9 months ago - Pushed at: almost 5 years ago - Stars: 7 - Forks: 1

cambridge-mlg/DUN
Code for "Depth Uncertainty in Neural Networks" (https://arxiv.org/abs/2006.08437)
Language: Jupyter Notebook - Size: 34.8 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 71 - Forks: 11

yufree/pmdda
reproducible repo for PMDDA paper
Language: HTML - Size: 1.25 GB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 1

carlosstack/reproducible-research
:tornado: :bar_chart: The basic goal of this project is to explore the NOAA Storm Database and answer some basic questions about severe weather events.
Language: HTML - Size: 579 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

crsh/reproducible-research-practices-workshop
Workshop on reproducible research practices for psychologists
Language: HTML - Size: 71.9 MB - Last synced at: about 2 months ago - Pushed at: about 3 years ago - Stars: 18 - Forks: 3

uf-repro/rmarkdown-intro
An Introduction to Writing Reproducible Manuscripts Using RMarkdown
Language: TeX - Size: 340 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

owenmackwood/pubfig
A simple module for creating publication-quality figures, and recreating them at the press of a button.
Language: Python - Size: 116 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 4 - Forks: 0

perwin/n4608-n4643
Files and code for reproducing analysis and figures in Erwin et al. (2020) paper on NGC 4608 and NGC 4643.
Language: Jupyter Notebook - Size: 157 MB - Last synced at: 7 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

perwin/barprofiles_paper
Files and Jupyter notebooks for paper on bar major-axis profiles
Language: Jupyter Notebook - Size: 17.3 MB - Last synced at: 7 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

perwin/s4g_barsizes
Files and Jupyter notebooks for paper on sizes of bars in spiral galaxies, using S4G data
Language: Jupyter Notebook - Size: 2.27 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 0

perwin/s4g_barfractions
Data files, code, and Jupyter notebooks for paper on frequency of bars in spiral galaxies, using S4G data
Language: Jupyter Notebook - Size: 4.35 MB - Last synced at: 3 months ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 1

perwin/db-nr_paper
Files and Jupyter notebooks for paper on frequency and sizes of double bars and nuclear rings in local barred galaxies.
Language: Jupyter Notebook - Size: 4.51 MB - Last synced at: 7 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

tpilz/paper_drought_prediction_brazil
Analysis scripts of the paper "Seasonal drought prediction for semiarid northeast Brazil: what is the added value of a process-based hydrological model?", published in HESS
Language: R - Size: 67.4 MB - Last synced at: 12 months ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 1

benmarwick/ktc11
Language: R - Size: 220 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 4

alan-turing-institute/memorization
Code for "On Memorization in Probabilistic Deep Generative Models"
Language: Python - Size: 51.8 KB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 0

SchlossLab/Sze_PCRSeqEffects_mSphere_2019
The impact of DNA polymerase and number of rounds of amplification in PCR on 16S rRNA gene sequence data
Language: TeX - Size: 45.6 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 5

SchlossLab/Hannigan_ConjunctisViribus_ploscompbio_2018
Using graph database techniques to understand the infectious relationships between bacteria and phages.
Language: PostScript - Size: 449 MB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 4

SchlossLab/Hannigan_CRCVirome_mBio_2018
Investigating the gut virus communities associated with colon cancer.
Language: PostScript - Size: 53.7 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 7

SchlossLab/Zackular_AbAOMDSS_mSphere_2015
Repository to accompany "Manipulation of the Gut Microbiome Reveals Role for Microbial Community Structure in Colon Tumorigenesis"
Language: R - Size: 31.3 MB - Last synced at: over 1 year ago - Pushed at: over 8 years ago - Stars: 4 - Forks: 0

SchlossLab/Schloss_PacBio16S_PeerJ_2015
Repository to accompany "Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system"
Language: Shell - Size: 1.29 MB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 6 - Forks: 2

csiro-crop-informatics/repset
Reproducible evaluation of short read mappers
Language: Nextflow - Size: 3.37 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 3

LindaBetz/APMS_NetworkTree
Code for "Disentangling heterogeneity of psychosis expression in the general population: sex-specific moderation effects of environmental risk factors on symptom networks", Psychological Medicine, 2021.
Language: R - Size: 1.1 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1

MartinHinz/bayesian.demographic.reconstruction.2022
Research compendium for ‘Bayesian inference of prehistoric population dynamics from multiple proxies: a case study from the North of the Swiss Alps’
Language: HTML - Size: 111 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0

cduvallet/microbiomeHD 📦
Cross-disease comparison of case-control gut microbiome studies
Language: Python - Size: 2.65 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 60 - Forks: 28

tfrank1971/LaTeX_Tutorial_CPT_PSP
LaTeX template files described in the article "LaTeX tutorial for the standardization and automation of population analysis reports"
Language: R - Size: 5.03 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 1

SchlossLab/Jenior_Modeling_mSystems_2017
Repo associated with Jenior et. al. (2017). Clostridium difficile Colonizes Alternative Nutrient Niches during Infection across Distinct Murine Gut Microbiomes. mSystems.
Language: R - Size: 373 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 1

SchlossLab/Jenior_Metatranscriptomics_mSphere_2018
Repository associated with Jenior ML, et al. (2018). mSphere.
Language: R - Size: 261 MB - Last synced at: almost 2 years ago - Pushed at: almost 7 years ago - Stars: 4 - Forks: 2

SchlossLab/Sze_CRCMetaAnalysis_mBio_2018
Language: R - Size: 172 MB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 6 - Forks: 3

SchlossLab/Sze_FollowUps_Microbiome_2017
Language: HTML - Size: 100 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 3

eveskew/bayesian_snake_movement
Analyzing snake movement data using Stan models (from R)
Language: R - Size: 568 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0

eveskew/frog_chytrid_transcriptomics
Code, data, and figures for an experimental pathogen exposure study using wood frogs and American bullfrogs
Language: R - Size: 129 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

AntonioFasano/rnw2pdf
Emacs library to convert (reproducible research) Rnw documents to PDFs
Language: Emacs Lisp - Size: 23.4 KB - Last synced at: almost 2 years ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 0

SchlossLab/Sze_Obesity_mBio_2016
Language: R - Size: 38 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 12 - Forks: 9

nuest/reproducible-research-and-giscience
Ready to use R Markdown notebook for the paper "Reproducible research and GIScience: an evaluation using AGILE conference papers"
Language: Dockerfile - Size: 1.16 MB - Last synced at: about 2 months ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 7

egouldo/ReproEcoDecisions
Are conservation and ecological decision support tools reproducible?
Language: TeX - Size: 1.26 MB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 4 - Forks: 1

fbrundu/py_session
Print session information
Language: Python - Size: 17.6 KB - Last synced at: 1 day ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1

jperkel/computed_manuscript
A model executable manuscript
Language: HTML - Size: 6.18 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 44 - Forks: 10

SchlossLab/Sovacool_OptiFit_mSphere_2022 📦
The manuscript accompanying the OptiFit algorithm in mothur
Language: Python - Size: 140 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 2

booktrackerGirl/Deep-Learning-Coursework--DropEdge
A coursework done as a part of my MSc module on Deep Learning.
Language: Jupyter Notebook - Size: 8.13 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

miriamspsantos/open-source-imbalance-overlap
A collection of Open Source Contributions in Learning from Imbalanced and Overlapped Data
Size: 7.81 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 1

frederic-santos/org-template-ijoa
An org-mode template for writing and submitting scientific articles to the International Journal of Osteoarchaeology
Language: TeX - Size: 269 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

RPanczak/TEMPO_syst-rev
R code and data to reproduce analyses of the systematic review by Panczak et al. (2020). Part of the TEMPO project.
Language: HTML - Size: 18.7 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

aframosp/AGNView
Reproduction repository for "The viewing angle in AGN SED models, a data-driven analysis"
Language: HTML - Size: 414 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

JoseRZapata/TempoAES42
Results of the paper: Zapata, Jose R.; Gómez, Emilia. "Comparative Evaluation and Combination of Audio Tempo Estimation Approaches", AES 42nd International Conference: Semantic Audio, Ilmenau, Germany. pp. 198 - 207, Jul 2011. in a jupyter notebook
Language: Jupyter Notebook - Size: 4.92 MB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 2 - Forks: 0

walice/Trade-IFF
Estimates of illicit financial flows due to trade misinvoicing
Language: R - Size: 339 KB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

fungenomics/G34-gliomas
Cell-of-origin analysis for "Histone H3.3G34-mutant interneuron progenitors co-opt PDGFRA for gliomagenesis" (Chen*, Deshmukh*, Jessa*, Hadjadj*, et al, Cell, 2020)
Language: HTML - Size: 27.3 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

sjessa/chromswitch-analysis
Code and data to accompany the chromswitch paper, "chromswitch: A flexible method for detecting chromatin state switches" (Jessa and Kleinman, Bioinformatics, 2018)
Language: R - Size: 228 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

SchlossLab/Schloss_PacBio16S_PeerJ_2016
Repo for Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system
Language: TeX - Size: 18.9 MB - Last synced at: about 2 years ago - Pushed at: about 9 years ago - Stars: 7 - Forks: 1

SchlossLab/Kozich_MiSeqSOP_AEM_2013
Reproducible analysis of sequence analysis on a MiSeq
Language: HTML - Size: 2.64 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 3

benmarwick/mjbnaturepaper
Language: R - Size: 102 MB - Last synced at: about 2 months ago - Pushed at: about 3 years ago - Stars: 5 - Forks: 0

SchlossLab/Schubert_AbxD01_mBio_2015
Reproducible workflow for Schubert et al. 2015 mBio
Language: R - Size: 59.4 MB - Last synced at: about 2 years ago - Pushed at: almost 10 years ago - Stars: 2 - Forks: 3

cambridge-mlg/arch_uncert
Code for "Variational Depth Search in ResNets" (https://arxiv.org/abs/2002.02797)
Language: Jupyter Notebook - Size: 5.92 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 9 - Forks: 5

frederic-santos/compendium-santos-2020-jasrep
A research compendium for an article published in JAS:Reports (2020), "Modern methods for old data: An overview of some robust methods for outliers detection with applications in osteology".
Language: TeX - Size: 1.51 MB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

walice/synth
Constructing a synthetic counterfactual to analyze impact of carbon taxes
Language: R - Size: 164 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

docmanny/smRecSearch
Snakemake Implementation of RecSearch featured in "Pervasive duplication of tumor suppressors in Afrotherians during the evolution of large bodies and reduced cancer risk"
Language: HTML - Size: 60.7 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 1

ctuning/ck-scc
The procedures and a workflow to prepare Student Cluster Competition submissions:
Language: Python - Size: 27.3 KB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 5 - Forks: 1

SchlossLab/Schubert_clinical_mBio_2014
Repository for Schubert et al. 2014 published in mBio
Language: Makefile - Size: 2.58 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

pliu55/PRAM_paper
Key results reported by PRAM's manuscript and scripts for reproducibility
Language: R - Size: 11.3 MB - Last synced at: 11 months ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

yassram/OrdNMF Fork of Oligou/OrdNMF
OrdNMF paper reproducibility
Language: Jupyter Notebook - Size: 21.1 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

discindo/booklet
Водич за најдобри пракси за повторлива обработка на податоци. A guide for best practices in reproducible data analysis (in Macedonian).
Language: HTML - Size: 4.77 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1

benmarwick/Pleistocene-aged-stone-artefacts-from-Jerimalai--East-Timor
Text, data and code to accompany the analysis of stone artefacts reported in Marwick et al.
Language: HTML - Size: 154 MB - Last synced at: 3 months ago - Pushed at: over 8 years ago - Stars: 2 - Forks: 0

flor14/latinr-reprohack Fork of annakrystalli/n8cir-reprohacks
♻🙌👩💻 ReproHack en la conferencia LatinR 2020
Language: CSS - Size: 14.3 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

SchlossLab/Baxter_glne007Modeling_GenomeMed_2015
Microbiota-based model improves the sensitivity for detecting colonic lesions
Language: R - Size: 47.2 MB - Last synced at: about 2 years ago - Pushed at: almost 9 years ago - Stars: 14 - Forks: 9

apdavison/bulbnet-reproduction
Code associated with the article "[Rp] Dendrodendritic inhibition and simulated odor responses in a detailed olfactory bulb network model"
Language: TeX - Size: 13.2 MB - Last synced at: about 19 hours ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 1

Pakillo/Carex.bipolar
Research compendium for "Niche shifts after long-distance dispersal events in bipolar sedges (Carex, Cyperaceae)"
Language: R - Size: 16.2 MB - Last synced at: 9 days ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0

RPanczak/TEMPO_census-mobility
R code and data to reproduce analyses of the paper by Charles-Edwards & Panczak (2018). Part of the TEMPO project.
Language: R - Size: 5.31 MB - Last synced at: over 2 years ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0

knightlab-analyses/qurro-mackerel-analysis
Simple re-analysis of mackerel and seawater marker gene sequencing samples in QIIME 2 + Songbird + Qurro
Language: HTML - Size: 94.7 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 1
