Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: bioinformatics-containers
pegi3s/dockerfiles
This repository contains Docker files for the images maintained by the Phenotypic Evolution Group at the Institute for Molecular and Cell Biology / Instituto de Investigação e Inovação em Saúde da Universidade do Porto.
Language: Dockerfile - Size: 38.9 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 44 - Forks: 12
pbenner/gonetics
Go / Golang Bioinformatics Library
Language: Go - Size: 6.08 MB - Last synced: 11 days ago - Pushed: 3 months ago - Stars: 40 - Forks: 1
CSBiology/BioFSharp
Open source bioinformatics and computational biology toolbox written in F#.
Language: F# - Size: 311 MB - Last synced: 3 days ago - Pushed: 17 days ago - Stars: 105 - Forks: 33
BioContainers/containers
Bioinformatics containers
Language: Dockerfile - Size: 8.07 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 634 - Forks: 233
BioContainers/specs
BioContainers specifications
Size: 479 KB - Last synced: 2 months ago - Pushed: about 1 year ago - Stars: 47 - Forks: 12
ikizhvatov/docker-ncbi-blast-mgi
NCBI BLAST+ wrapper for WashU MGI cluster
Language: Dockerfile - Size: 0 Bytes - Last synced: 5 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
csiro-crop-informatics/repset
Reproducible evaluation of short read mappers
Language: Nextflow - Size: 3.37 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 2 - Forks: 3
JFresnedo/AmpSeq
A framework for semi-automated analysis of Amplicon Sequencing data
Language: Perl - Size: 331 MB - Last synced: 7 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 4
sablokgaurav/ruby_on_rails_app_for_genomic_trait_analysis_genome
This repository contains a complete ruby on rails application for the development and analysis of genomic traits for the sequenced genomes and how it can be deployed for the machine learning. It integrates sqlite3 and postgresql as a backhand and uses bootstrap for the custom appearance.
Size: 1.95 KB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0
ahmedmoustafa/bioinformatics-toolbox
Docker container for bioinformatics tools and pipelines
Language: Dockerfile - Size: 2.69 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 10 - Forks: 5
ronin-gw/alpine-sugar
A docker container for biomedinfo/sugar.
Language: Dockerfile - Size: 44.1 MB - Last synced: 9 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
MmasterT/eihic
Bioinformatic pipeline to do QC oh Hi-C reads and manual curation with the contact matrices.
Language: Python - Size: 91.8 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
blekhmanlab/docker_dada2
Docker convenience image containing R and the DADA2 package (plus dependencies), used for processing amplicon data.
Language: Dockerfile - Size: 7.81 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1
mpg-age-bioinformatics/software_docker
Dockerfiles used to create the docker images containing most of the software we use.
Language: Dockerfile - Size: 563 KB - Last synced: 2 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 3
oandrefonseca/neoANT-HILL Fork of neoanthill/neoANT-HILL
Integrated tool for prediction of potential neoantigens - A fork from our original publication @ neoanthill/neoANT-HILL
Size: 53.1 MB - Last synced: 12 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0
sbamin/gdc-client
docker container for running NCI GDC gdc-client
Language: Shell - Size: 31.3 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 4 - Forks: 2
andremrsantos/faststructure-docker
Docker image to run fastSTRUCTURE (Raj et al. 2014)
Size: 1.95 KB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 1
