jasp-stats/jaspMetaAnalysis

The Meta Analysis Module

Language: R - Size: 51.8 MB - Last synced: about 15 hours ago - Pushed: about 16 hours ago - Stars: 8 - Forks: 15

neelsoumya/dsSurvivalShiny

This is a package with miscellaneous tools, a set of computational tools and a graphical user interface (GUI) for privacy preserving federated survival model meta-analysis using the DataSHIELD platform. The primary function is to enable data and model documentation.

Language: R - Size: 11.7 MB - Last synced: about 18 hours ago - Pushed: about 20 hours ago - Stars: 1 - Forks: 0

canlab/CanlabCore

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Language: MATLAB - Size: 804 MB - Last synced: 1 day ago - Pushed: 1 day ago - Stars: 142 - Forks: 77

IndrajeetPatil/statsExpressions

Tidy data frames and expressions with statistical summaries 📜

Language: R - Size: 36.5 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 307 - Forks: 19

jasp-stats/jaspCochrane

Language: R - Size: 175 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 4 - Forks: 6

cran-task-views/MetaAnalysis

CRAN Task View: Meta-Analysis

Size: 75.2 KB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 9 - Forks: 6

sourceduty/Metadata_Generator

📄 Generate and analyze metadata using uploaded files. Create knowledge tags and meta-information reports.

Size: 2.93 KB - Last synced: 5 days ago - Pushed: 6 days ago - Stars: 0 - Forks: 0

ht-diva/meta_pipeline

Language: Python - Size: 56.6 KB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 0

markziemann/ART_methylation

Meta-analysis of DNA methylation in ART

Language: R - Size: 196 MB - Last synced: 5 days ago - Pushed: over 1 year ago - Stars: 3 - Forks: 2

wviechtb/metafor

A meta-analysis package for R

Language: R - Size: 146 MB - Last synced: 9 days ago - Pushed: 9 days ago - Stars: 208 - Forks: 50

prisma-flowdiagram/PRISMA2020

Produce PRISMA-2020 compliant flow diagrams

Language: R - Size: 2.16 MB - Last synced: 8 days ago - Pushed: 9 days ago - Stars: 107 - Forks: 57

neurostuff/NiMARE

Coordinate- and image-based meta-analysis in Python

Language: Python - Size: 30.8 MB - Last synced: 9 days ago - Pushed: 9 days ago - Stars: 172 - Forks: 56

metapsy-project/metapsyTools

Read-only repository for the package "metapsyTools".

Language: R - Size: 19.3 MB - Last synced: 6 days ago - Pushed: 10 days ago - Stars: 4 - Forks: 0

phodal/chapi

CHAPI (Common Hierarchical Abstract Parser and Information Converter) streamlines code analysis by converting diverse language source code into a unified abstract model, simplifying cross-language development. Chapi 是一个通用层次抽象解析器与信息转换器，它可以将不同编程语言的源代码转换为统一的层次抽象模型。

Language: Kotlin - Size: 4.44 MB - Last synced: 7 days ago - Pushed: 3 months ago - Stars: 251 - Forks: 43

PecanProject/pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

Language: R - Size: 389 MB - Last synced: 13 days ago - Pushed: 15 days ago - Stars: 198 - Forks: 227

xwang297/metamate-dataset

MetaMate: Large Language Model to the Rescue of Automated Data Extraction for Educational Systematic Reviews and Meta-analyses

Size: 208 KB - Last synced: 12 days ago - Pushed: 13 days ago - Stars: 1 - Forks: 0

krassowski/easy-entrez

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

Language: Python - Size: 120 KB - Last synced: 4 days ago - Pushed: 6 months ago - Stars: 61 - Forks: 6

neurostuff/PyMARE

PyMARE: Python Meta-Analysis & Regression Engine

Language: Python - Size: 364 KB - Last synced: 13 days ago - Pushed: 14 days ago - Stars: 46 - Forks: 10

ropensci/biomartr

Genomic Data Retrieval with R

Language: R - Size: 5.73 MB - Last synced: 3 days ago - Pushed: 5 months ago - Stars: 206 - Forks: 29

psychmeta/psychmeta

Psychometric meta-analysis toolkit

Language: R - Size: 4.78 MB - Last synced: 16 days ago - Pushed: 16 days ago - Stars: 49 - Forks: 14

TIGMINT/TIGMINT

TIGMINT: OSINT (Open Source Intelligence) GUI software framework

Language: JavaScript - Size: 187 MB - Last synced: 17 days ago - Pushed: almost 3 years ago - Stars: 220 - Forks: 44

VNyaga/Metapreg

Evidence synthesis of proportions

Language: Stata - Size: 1.05 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 0 - Forks: 0

drewhabrich/MetaUrbanConn

A repo to track version control and changes for project based workflow for meta-analysis of urban connectivity research

Language: R - Size: 67.8 MB - Last synced: 20 days ago - Pushed: 21 days ago - Stars: 1 - Forks: 0

pbagos/mage

MAGE :: Meta-Analysis of Gene Expression

Language: Python - Size: 7.04 MB - Last synced: 21 days ago - Pushed: 21 days ago - Stars: 8 - Forks: 0

rmetaverse/pubBias

Collection of Publication Bias Packages for the Metaverse

Language: R - Size: 5.86 KB - Last synced: 21 days ago - Pushed: about 5 years ago - Stars: 2 - Forks: 1

kylehamilton/MAJOR

Meta-Analysis for JAMOVI

Language: C++ - Size: 319 MB - Last synced: 21 days ago - Pushed: 12 months ago - Stars: 17 - Forks: 7

miyamot0/scarf-ui

The SCARF-UI is an extension of the SCARF review tool for appraising results from single-case experimental designs (SCEDs)

Language: TypeScript - Size: 798 KB - Last synced: 23 days ago - Pushed: 24 days ago - Stars: 0 - Forks: 0

zhichaoxu04/MetaR2M

A novel meta-analysis framework of the R-squared (R2)-based mediation effect estimation for high-dimensional omics mediators

Language: R - Size: 1.27 MB - Last synced: 25 days ago - Pushed: 26 days ago - Stars: 1 - Forks: 0

swvanderlaan/MetaGWASToolKit

A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies

Language: Shell - Size: 477 MB - Last synced: 25 days ago - Pushed: 25 days ago - Stars: 12 - Forks: 2

UCL/metafloat

Estimation of covariate interactions and subgroup-specific treatment effects in meta-analysis.

Language: Stata - Size: 282 KB - Last synced: 26 days ago - Pushed: 27 days ago - Stars: 0 - Forks: 0

apallath/crossref_miner 📦

A simple tool to fetch citations using the Crossref REST API.

Language: Python - Size: 7.81 KB - Last synced: 27 days ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

phil-martin-research/precip_changes_soil_fauna

This is the data and code to reproduce the results for the paper "Meta-analysis reveals that the effects of precipitation change on soil and litter fauna in forests depend on body size."

Language: R - Size: 81.5 MB - Last synced: 27 days ago - Pushed: 28 days ago - Stars: 0 - Forks: 0

sanjaynagi/AnoExpress

Anopheles gene expression in insecticide resistance studies

Language: Jupyter Notebook - Size: 82.1 MB - Last synced: 14 days ago - Pushed: 4 months ago - Stars: 2 - Forks: 0

saezlab/liver-disease-atlas

Transcriptomic cross-species analysis of chronic liver disease reveals consistent regulation between humans and mice

Language: R - Size: 71.9 MB - Last synced: 29 days ago - Pushed: over 2 years ago - Stars: 1 - Forks: 3

lisc-tools/lisc

Literature Scanner: Automated collection & analyses of the scientific literature.

Language: Python - Size: 6.21 MB - Last synced: 29 days ago - Pushed: 30 days ago - Stars: 86 - Forks: 11

HALFpipe/HALFpipe

ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data

Language: Python - Size: 5.32 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 59 - Forks: 11

guido-s/meta

Official Git repository of R package meta

Language: R - Size: 7.95 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 73 - Forks: 30

szymekdr/colour-pollution-MA

Language: HTML - Size: 3.3 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

nealhaddaway/citationchaser

Perform forward and backward citation chasing as part of an evidence synthesis project

Language: R - Size: 1.65 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 104 - Forks: 10

kylehamilton/MAVIS

MAVIS: Meta Analysis via Shiny

Language: R - Size: 240 KB - Last synced: 21 days ago - Pushed: about 6 years ago - Stars: 35 - Forks: 14

MoTrPAC/motrpac_public_data_analysis

Language: R - Size: 1.87 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 3 - Forks: 1

MathiasHarrer/dmetar

Official repository for the "dmetar" R package. [Read-Only]

Language: R - Size: 31.3 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 32 - Forks: 19

FBartos/RoBMA

RoBMA R package for estimating robust Bayesian meta-analyses

Language: R - Size: 1.41 GB - Last synced: 9 days ago - Pushed: about 1 month ago - Stars: 7 - Forks: 2

TreeBASE/supertreebase

Analysis of TreeBASE data through the NeXML API

Language: Perl - Size: 512 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 7 - Forks: 6

JulioAPeraza/gradec

Meta-analytic gradient decoding

Language: Python - Size: 140 KB - Last synced: 2 days ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0

mshin77/2022ksse

Longitudinal analysis for single-ase experimental design meta-analyses: Using R (2022 한국특수교육학회 동계학술대회)

Language: SCSS - Size: 8.97 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

wviechtb/metadat

Meta-analytic datasets for R

Language: R - Size: 23 MB - Last synced: 4 days ago - Pushed: 4 months ago - Stars: 29 - Forks: 17

mikewlcheung/metasem

metaSEM package

Language: HTML - Size: 11.1 MB - Last synced: 6 days ago - Pushed: about 1 month ago - Stars: 28 - Forks: 10

Yingjie4Science/meta-analysis-nature-health

Language: R - Size: 6.77 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

ESHackathon/eviatlas

A tool for visualising geographical data in systematic maps

Language: R - Size: 4.47 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 23 - Forks: 11

rmetaverse/metaverse

Package to provide consistent evidence synthesis workflow in R

Language: R - Size: 5.56 MB - Last synced: 21 days ago - Pushed: almost 4 years ago - Stars: 49 - Forks: 7

NBCLab/cmhc

MATLAB-based code for correlation matrix based hierarchical clustering

Language: Matlab - Size: 3.05 MB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 3 - Forks: 2

cecoeco/PRISMA.jl

Generate checklists and flow diagrams based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) statement.

Language: JavaScript - Size: 5.1 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 1

remlapmot/confunnel-stata

Stata command implementing contour enhanced funnel plots for meta-analysis

Language: Stata - Size: 510 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 1 - Forks: 0

zhanxw/seqminer

Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R

Language: C - Size: 6.99 MB - Last synced: 8 days ago - Pushed: 3 months ago - Stars: 30 - Forks: 12

wenjie-tu/FBM

💡 Foundations of Bayesian Methodology

Language: HTML - Size: 49.8 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 4 - Forks: 0

GerHobbelt/qiqqa-open-source Fork of jimmejardine/qiqqa-open-source

The open-sourced version of the award-winning Qiqqa research management tool for Windows (a bleeding edge dev fork) ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ☞☞☞ File any issues you find in the main repo issue tracker at https://github.com/jimmejardine/qiqqa-open-source/issues

Language: TeX - Size: 1.43 GB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 44 - Forks: 5

strengejacke/esc

Effect Size Computation for Meta Analysis

Language: R - Size: 341 KB - Last synced: 19 days ago - Pushed: 8 months ago - Stars: 19 - Forks: 5

OpenNeuroLab/brainspell-neo

Working on a new version of Brainspell (an open-source platform for neuroimaging literature) to make a public JSON API that collaborators can contribute to, switch out the stack for better scalability, and provide statistical features to better conduct meta-analyses.

Language: PLpgSQL - Size: 67.4 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 13 - Forks: 6

smartdata-analysis-and-statistics/metamisc

This is the official repository of the R package metamisc

Language: R - Size: 8.03 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 2 - Forks: 0

jinghuazhao/INF

SCALLOP-INF analysis

Language: Shell - Size: 462 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 16 - Forks: 4

guido-s/metasens

Official Git repository of R package metasens

Language: R - Size: 653 KB - Last synced: 19 days ago - Pushed: about 1 year ago - Stars: 6 - Forks: 2

UCL/ipdmetan

Two-stage meta-analysis of Individual Participant Data (IPD)

Language: Stata - Size: 653 KB - Last synced: 28 days ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

UCL/metan

Fixed and random effects meta-analysis of aggregate data

Language: Stata - Size: 14.5 MB - Last synced: 28 days ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

NBCLab/gradient-decoding

Methods for decoding cortical gradients of functional connectivity

Language: Jupyter Notebook - Size: 96.3 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

VNyaga/Metadta

Meta-regression of diagnostic accuracy studies in Stata

Language: Stata - Size: 830 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0

GeneMAP-Research/genemapgwas

gwas workflow from raw intensity data to in-silico functional mapping

Language: Nextflow - Size: 660 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 0

xihaoli/MetaSTAAR

An R package for performing MetaSTAAR procedure in whole-genome sequencing studies

Language: R - Size: 1.41 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 19 - Forks: 4

MathiasHarrer/Doing-Meta-Analysis-in-R

[Read-Only] All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"

Language: R - Size: 340 MB - Last synced: 3 months ago - Pushed: 12 months ago - Stars: 294 - Forks: 177

EIvimeyCook/shinyDigitise

shinyDigitise: The GUI for metaDigitise

Language: R - Size: 998 KB - Last synced: 11 days ago - Pushed: about 2 months ago - Stars: 6 - Forks: 2

wwiecek/baggr

R package for Bayesian meta-analysis models, using Stan

Language: R - Size: 12.8 MB - Last synced: 2 months ago - Pushed: 3 months ago - Stars: 44 - Forks: 12

dbeillouin/MetaSynthesis

Meta-Synthesis

Language: R - Size: 1.41 MB - Last synced: 4 months ago - Pushed: 11 months ago - Stars: 1 - Forks: 1

peterdalle/effectsizes-comm

Effect sizes from 60 years of commuication research

Size: 96.7 KB - Last synced: 4 months ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0

peterdalle/effectsizes

One hundred years of social psychology quantitatively described

Size: 85 KB - Last synced: 4 months ago - Pushed: about 6 years ago - Stars: 7 - Forks: 1

thlytras/miniMeta

Web application to run meta-analyses

Language: R - Size: 145 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 3 - Forks: 1

MeteSertkan/ranger

Ranger helps you see the forest among the trees - Ranger is an effect-size meta analysis library creating beautiful forest plots!

Language: Python - Size: 4.46 MB - Last synced: 4 months ago - Pushed: 11 months ago - Stars: 10 - Forks: 0

ERPscanr/ERPscanr

Automated meta-analysis of event-related potential (ERP) research.

Language: Jupyter Notebook - Size: 197 MB - Last synced: 3 months ago - Pushed: 6 months ago - Stars: 33 - Forks: 6

egouldo/ManyEcoEvo

Software for analysing Many-Analysts' style data and generating the ManyEcoEvo project data

Language: R - Size: 15.3 MB - Last synced: 4 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 0

rexaamiri/MetaAnalysis

An Introduction to Meta-Analysis with R (KITE Trainees)

Language: HTML - Size: 6.59 MB - Last synced: 5 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

guido-s/netmeta

Official Git repository of R package netmeta

Language: R - Size: 3.22 MB - Last synced: 9 days ago - Pushed: about 1 month ago - Stars: 23 - Forks: 11

AEBilgrau/GMCM

Unsupervised Clustering and Meta-analysis using Gaussian Mixture Copula Models

Language: R - Size: 25.7 MB - Last synced: 29 days ago - Pushed: over 2 years ago - Stars: 14 - Forks: 3

StatisticsHealthEconomics/gender-bias-in-hiring

The project can be split into different sub-projects (easy difficulty: replication of the published meta-analysis for evidence of gender bias in hiring decisions; medium for newer modelling). Requires skills in R and will require some learning on Bayesian modelling.

Size: 146 KB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 0

StatisticsHealthEconomics/covid

The project can be split into different sub-projects (easy-medium difficulty: meta-analysis of COVID vaccines; medium-high difficulty: estimating excess mortality due to COVID). Requires skills in R and will require some learning on Bayesian modelling.

Size: 26.4 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 2 - Forks: 0

Novartis/RBesT

Tool-set to support Bayesian evidence synthesis in R

Language: R - Size: 11.3 MB - Last synced: 29 days ago - Pushed: 4 months ago - Stars: 12 - Forks: 2

kylehamilton/JamoviMeta

Meta-Analysis for JAMOVI

Language: R - Size: 7.72 MB - Last synced: 21 days ago - Pushed: over 6 years ago - Stars: 11 - Forks: 4

crb479/mcdevitt-trauma-ml

This repository contains the scripts for the ML-Trauma project of the McDevitt Lab at NYU.

Language: Python - Size: 10.5 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 1

sheny2/Heterogeneity-in-MA

Study heterogeneity and its effects from over 30,000 meta-analyses from the Cochrane Library Database.

Language: HTML - Size: 271 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

zhanxw/rvtests

Rare variant test software for next generation sequencing data

Language: C++ - Size: 32.7 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 120 - Forks: 41

neelsoumya/dsSurvival

Survival functions for DataSHIELD. Package for building survival models, Cox proportional hazards models and Cox regression models in DataSHIELD.

Language: R - Size: 4.25 MB - Last synced: 7 months ago - Pushed: 11 months ago - Stars: 5 - Forks: 8

SiminaB/MVMA

Code, figures, and tables for paper "Multivariate meta-analysis with an increasing number of parameters"

Language: TeX - Size: 810 MB - Last synced: 7 months ago - Pushed: over 7 years ago - Stars: 1 - Forks: 1

RayDebashree/GWAStools

A curated list (with links) of useful tools for genome-wide association analysis.

Size: 4.88 KB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 7 - Forks: 4

qianyingw/meta-analysis-app-syrf

Language: R - Size: 232 KB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 3

NBCLab/pyale 📦

A Python implementation of the activation likelihood estimation (ALE) meta-analytic algorithm. Deprecated in favor of NiMARE.

Language: Python - Size: 6.4 MB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0

mcguinlu/PRISMA-Checklist

This repo contains the code supporting the PRISMA 2020 Checklist web app.

Language: R - Size: 1.35 MB - Last synced: 7 months ago - Pushed: about 3 years ago - Stars: 3 - Forks: 0

KevCaz/graphsMetaAnalyses

:book: metaAnalyses - QCBS - visualization

Language: Makefile - Size: 9.28 MB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

hyemin-han/BayesFactorFMRI

BayesFactorFMRI is a tool developed with R and Python to allow neuroimaging researchers to conduct Bayesian second-level analysis of fMRI data and Bayesian meta-analysis of fMRI images with multiprocessing.

Language: Python - Size: 110 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 6 - Forks: 0

daniel1noble/metaAidR

Functions for aiding meta-analyses in Ecology, Evolution and beyond

Language: R - Size: 297 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 5 - Forks: 6

NMikolajewicz/MetaLab

Meta-analysis toolbox for basic research applications. Developed in MATLAB R2016b.

Language: MATLAB - Size: 3.07 MB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 9 - Forks: 6

RayDebashree/metaUSAT

metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using univariate GWAS summary statistics.

Language: R - Size: 223 KB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 16 - Forks: 4

Mechanism-Labs/MetaAnalysis-of-Alternative-Consensus-Protocols

This paper presents the first systematization of knowledge within these major blockchain protocols, understanding the common challenges and solutions, and providing a formal structure within which to compare them. We break down these protocols by network, adversarial, and economic model, deeply understanding the common challenges of choosing proposers and committees, propogation, and finality.

Language: TeX - Size: 1.52 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 92 - Forks: 13