jasp-stats/jaspCochrane

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jasp-stats/jaspMetaAnalysis

The Meta Analysis Module

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ESHackathon/eviatlas

A tool for visualising geographical data in systematic maps

Language: R - Size: 4.43 MB - Last synced at: 2 days ago - Pushed at: about 2 months ago - Stars: 30 - Forks: 10

jepusto/metaselection

Meta-analytic p-value selection models with cluster-robust and cluster-bootstrap standard errors

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guido-s/meta

Official Git repository of R package meta

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PecanProject/pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

Language: R - Size: 409 MB - Last synced at: 2 days ago - Pushed at: 5 days ago - Stars: 219 - Forks: 256

canlab/CanlabCore

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Language: MATLAB - Size: 956 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 152 - Forks: 86

ehm-lab/2019_sera_StatMed_Rcode Fork of gasparrini/2019_sera_StatMed_Rcode

A general framework for meta-analysis based on linear mixed-effects models

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ehm-lab/2019_armstrong_EHP_Rcodedata Fork of gasparrini/2019_armstrong_EHP_Rcodedata

An assessment of the role of humidity in associations between temperature and mortality

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ehm-lab/2011_gasparrini_Epidem_Rcode Fork of gasparrini/2011_gasparrini_Epidem_Rcode

The impact of heat waves on mortality

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IndrajeetPatil/statsExpressions

Tidy data frames and expressions with statistical summaries 📜

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li-lab-genetics/MetaSTAARlite

A lightweight R package for performing association meta-analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using MetaSTAARlite pipeline

Language: R - Size: 9.69 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 3 - Forks: 2

TIGMINT/TIGMINT

TIGMINT: OSINT (Open Source Intelligence) GUI software framework

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HALFpipe/HALFpipe

ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data

Language: Python - Size: 9.2 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 90 - Forks: 14

prisma-flowdiagram/PRISMA2020

Produce PRISMA-2020 compliant flow diagrams

Language: R - Size: 2.19 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 169 - Forks: 81

ERPscanr/ERPscanr

Automated meta-analysis of event-related potential (ERP) research.

Language: Jupyter Notebook - Size: 197 MB - Last synced at: 8 days ago - Pushed at: 9 months ago - Stars: 39 - Forks: 9

PierreMasselot/RiskExtrapolation

Modelling extensions for multi-location studies in environmental epidemiology

Language: R - Size: 8.82 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 5 - Forks: 4

wviechtb/metafor

A meta-analysis package for R

Language: R - Size: 170 MB - Last synced at: 6 days ago - Pushed at: 24 days ago - Stars: 251 - Forks: 52

metapsy-project/metapsyDocs

Repository of the Metapsy documentation website

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ropensci/biomartr

Genomic Data Retrieval with R

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phodal/chapi

CHAPI (Common Hierarchical Abstract Parser and Information Converter) streamlines code analysis by converting diverse language source code into a unified abstract model, simplifying cross-language development. Chapi 是一个通用层次抽象解析器与信息转换器，它可以将不同编程语言的源代码转换为统一的层次抽象模型。

Language: Kotlin - Size: 4.61 MB - Last synced at: 3 days ago - Pushed at: 5 months ago - Stars: 294 - Forks: 45

Yingjie4Science/meta-analysis-nature-health

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MathiasHarrer/Doing-Meta-Analysis-in-R

[Read-Only] All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"

Language: R - Size: 340 MB - Last synced at: 13 days ago - Pushed at: 8 months ago - Stars: 386 - Forks: 197

SyNUM-lab/NDD-Transcriptomics Fork of jarnokoetsier/NDD-Transcriptomics

Integrative analysis of 115 transcriptomic studies decodes the molecular landscape of neurodevelopmental disorders

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jarnokoetsier/NDD-Transcriptomics

Integrative analysis of 115 transcriptomic studies decodes the molecular landscape of neurodevelopmental disorders

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wviechtb/metadat

Meta-analytic datasets for R

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cran-task-views/MetaAnalysis

CRAN Task View: Meta-Analysis

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mirzafarangi/meta-mar

AI-integrated meta-analysis platform for research and education

Language: R - Size: 20.5 KB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 0 - Forks: 0

krassowski/easy-entrez

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

Language: Python - Size: 120 KB - Last synced at: 12 days ago - Pushed at: over 1 year ago - Stars: 77 - Forks: 6

lisc-tools/lisc

Literature Scanner: Automated collection & analyses of the scientific literature.

Language: Python - Size: 6.84 MB - Last synced at: 6 days ago - Pushed at: about 1 month ago - Stars: 106 - Forks: 12

wviechtb/meta_analysis_books

R code for meta-analysis books

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matthijsz/pysumstats

Python package for reading, combining, meta-analyzing, and saving GWAS summary statistics data.

Language: Python - Size: 436 KB - Last synced at: 10 days ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 0

kevolve/heritability-meta

Analysis for the manuscript: 'Coral adaptation to climate change: Meta-analysis reveals high heritability across multiple traits', published in Global Change Biology

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xwang297/metamate-dataset

MetaMate: Large Language Model to the Rescue of Automated Data Extraction for Educational Systematic Reviews and Meta-analyses

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guido-s/netmeta

Official Git repository of R package netmeta

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neurostuff/NiMARE

Coordinate- and image-based meta-analysis in Python

Language: Python - Size: 31 MB - Last synced at: 7 days ago - Pushed at: about 1 month ago - Stars: 189 - Forks: 58

nealhaddaway/citationchaser

Perform forward and backward citation chasing as part of an evidence synthesis project

Language: R - Size: 1.65 MB - Last synced at: 20 days ago - Pushed at: about 1 month ago - Stars: 121 - Forks: 10

NBCLab/gradient-decoding

Methods for decoding cortical gradients of functional connectivity

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nopsybot/yemama-app

companion app for Drexl et al. (in press) Readdressing missing data ... JMIR doi: 10.2196/65710

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smartdata-analysis-and-statistics/metamisc

This is the official repository of the R package metamisc

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sanjaynagi/AnoExpress

Anopheles gene expression in insecticide resistance studies

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mikewlcheung/metasem

metaSEM package

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PierreMasselot/MCC-PMtoxicity

A multi-country analysis of differential PM2.5-related mortality risks by pollutant mixture complexity

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metapsy-project/metapsyTools

Read-only repository for the package "metapsyTools".

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egouldo/ManyEcoEvo

Software for analysing Many-Analysts' style data and generating the ManyEcoEvo project data

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MariePittet/meta_analysis_CogVar

Meta-analysis on discriminant validity (Hedges g) of various cognitive tests. Risk of bias and forest plots

Language: R - Size: 13.7 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

psychmeta/psychmeta

Psychometric meta-analysis toolkit

Language: R - Size: 5.05 MB - Last synced at: 17 days ago - Pushed at: 10 months ago - Stars: 59 - Forks: 14

Novartis/RBesT

Tool-set to support Bayesian evidence synthesis in R

Language: R - Size: 15 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 23 - Forks: 2

horberlan/forest-plot

Forest Plot - Meta analysis with the meta package in R :bar_chart:

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MathiasHarrer/dmetar

Official repository for the "dmetar" R package. [Read-Only]

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ZjpWei/PALM_package

Fast and reliable association discovery in large-scale microbiome studies and meta-analyses using PALM. (R package)

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FBartos/RoBMA

RoBMA R package for estimating robust Bayesian meta-analyses

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pbagos/mage

MAGE :: Meta-Analysis of Gene Expression

Language: Python - Size: 7.05 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 8 - Forks: 0

ZjpWei/PALM

Fast and reliable association discovery in large-scale microbiome studies and meta-analyses using PALM. (Simulation and real data analysis)

Language: R - Size: 119 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

StatisticsHealthEconomics/gender-bias-in-hiring

The project can be split into different sub-projects (easy difficulty: replication of the published meta-analysis for evidence of gender bias in hiring decisions; medium for newer modelling). Requires skills in R and will require some learning on Bayesian modelling.

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paperfetcher/paperfetcher

Pip-installable Python package to automate handsearching and citation searching for systematic reviews.

Language: Python - Size: 5.92 MB - Last synced at: 9 days ago - Pushed at: 9 months ago - Stars: 12 - Forks: 2

GerHobbelt/qiqqa-open-source Fork of jimmejardine/qiqqa-open-source

The open-sourced version of the award-winning Qiqqa research management tool for Windows (a bleeding edge dev fork) ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ・ ☞☞☞ File any issues you find in the main repo issue tracker at https://github.com/jimmejardine/qiqqa-open-source/issues

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jcaperella29/Meta_Analysis-on-RNA_SEQ-data-using-Metaseq

An R script that performs Meta_analysis on RNA_seq data from multiple studies

Language: R - Size: 3.91 KB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

GeneMAP-Research/genemapgwas

gwas workflow from raw intensity data to in-silico functional mapping

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swvanderlaan/MetaGWASToolKit

A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies

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neelsoumya/dsSurvival

Survival functions for DataSHIELD. Package for building survival models, Cox proportional hazards models and Cox regression models in DataSHIELD.

Language: R - Size: 4.25 MB - Last synced at: 17 days ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 12

nealhaddaway/bibfix

Repair bibliographic data

Language: R - Size: 16.6 MB - Last synced at: 20 days ago - Pushed at: 4 months ago - Stars: 26 - Forks: 3

neurostuff/PyMARE

PyMARE: Python Meta-Analysis & Regression Engine

Language: Python - Size: 374 KB - Last synced at: 7 days ago - Pushed at: 7 months ago - Stars: 56 - Forks: 14

ZjpWei/Melody

Melody: Meta-analysis of Microbiome Association Studies for Discovering Generalizable Microbial Signatures. (Simulation and Real data analysis)

Language: R - Size: 179 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

VNyaga/Metadta

Meta-regression of diagnostic accuracy studies in Stata

Language: Stata - Size: 837 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

remlapmot/confunnel-stata

Stata command implementing contour enhanced funnel plots for meta-analysis

Language: Stata - Size: 729 KB - Last synced at: 9 days ago - Pushed at: 9 months ago - Stars: 3 - Forks: 0

li-lab-genetics/MetaSTAARlite-Tutorial

The tutorial for performing association meta-analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, MetaSTAARlite and MetaSTAARliteSummary

Language: R - Size: 126 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 1

irissun/detectnorm

Detect non-normality of primary studies in meta-analysis

Language: R - Size: 533 KB - Last synced at: 17 days ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0

sourceduty/Metadata_Generator

📄 Generate and analyze metadata using uploaded files. Create knowledge tags and meta-information reports.

Size: 9.77 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

nealhaddaway/livingPRISMAflow

Produce living systematic review flow diagrams that conform to PRISMA checklist standards

Language: R - Size: 2.2 MB - Last synced at: 20 days ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 0

MoTrPAC/motrpac_public_data_analysis

Language: R - Size: 1.87 MB - Last synced at: 3 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 2

PharmCat/ForestPlot.jl

A simple package to draw forest plots for meta-analysis study

Language: Julia - Size: 635 KB - Last synced at: 15 days ago - Pushed at: 8 months ago - Stars: 5 - Forks: 0

wxgao33/xMarkerFinder

Microbial marker identification from cross-cohort datasets

Language: Python - Size: 11.4 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 4 - Forks: 5

mary-python/agm-cgm

Quantifying statistical heterogeneity using a single-client skewness measure

Language: Python - Size: 342 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0

nealhaddaway/predicter

A Tool to Estimate the Time Needed to Conduct a Systematic Review or Systematic Map

Language: R - Size: 37.1 KB - Last synced at: 20 days ago - Pushed at: over 2 years ago - Stars: 15 - Forks: 0

drewhabrich/MetaUrbanConn

A repo to track version control and changes for project based workflow for meta-analysis of urban connectivity research

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xihaoli/MetaSTAAR

An R package for performing MetaSTAAR procedure in whole-genome sequencing studies

Language: R - Size: 1.43 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 21 - Forks: 7

bhklab/MetaGx

Scripts to perform meta-analysis of cancer gene expression datasets

Language: R - Size: 12.5 MB - Last synced at: 7 days ago - Pushed at: about 7 years ago - Stars: 7 - Forks: 8

bmascat/meta-analysis-alms

Frequentist analysis of the genotype-phenotype associations in patients with Alström syndrome

Language: R - Size: 1.12 MB - Last synced at: about 1 month ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

MatthewBJane/meta-analysis-data-code

Meta-Analysis Projects

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MeteSertkan/meta-analysis-based-recsys-eval

Effect-Size-Based Meta-Analysis for Multi-Dataset Evaluation of RecSys Experiments

Language: Jupyter Notebook - Size: 4.13 MB - Last synced at: 2 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

CBFLivUni/Sulfo_Tyrosine

Searching for Sulfotyrosines (sY) in a HA(pY)STACK

Language: Python - Size: 49.5 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

zhanxw/seqminer

Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R

Language: C - Size: 7.99 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 30 - Forks: 12

noah-schroeder/simple_meta-analysis

Simple Meta-Analysis - A graphic user interface for running conventional meta-analysis, three-level meta-analysis, and three-level meta-analysis with correlated and hierarchical effects and robust variance estimation.

Language: R - Size: 881 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

EGOstinelli/cNMA_on_adults_with_ADHD

Your friendly neighbourhood component network meta-analysis on ADHD.

Size: 1.11 GB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

mcguinlu/PRISMA-Checklist

This repo contains the code supporting the PRISMA 2020 Checklist web app.

Language: R - Size: 1.35 MB - Last synced at: 18 days ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 0

lytello/suicide-previously-incarcerated

Systematic review and meta-analysis workflow documentation

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LudovicGardy/meta_analysis_alzheimer

This program allows users to reproduce the meta-analysis results from [L. Gardy et al., 2021] and [S. Joubert et al., 2021], or to perform new meta-analyses on other data using the same process and code.

Language: Python - Size: 1.67 MB - Last synced at: 2 days ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

kylehamilton/MAVIS

MAVIS: Meta Analysis via Shiny

Language: R - Size: 240 KB - Last synced at: 18 days ago - Pushed at: about 7 years ago - Stars: 36 - Forks: 14

nealhaddaway/greylitsearcher

Search and scrape results from targeted website searches of Google.com

Language: R - Size: 2.89 MB - Last synced at: 20 days ago - Pushed at: almost 3 years ago - Stars: 8 - Forks: 0

csbl-br/pebba

A tool for ORA meta-analysis

Language: Python - Size: 10.1 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

AEBilgrau/GMCM

Unsupervised Clustering and Meta-analysis using Gaussian Mixture Copula Models

Language: R - Size: 25.7 MB - Last synced at: 5 days ago - Pushed at: over 3 years ago - Stars: 15 - Forks: 3

thlytras/miniMeta

Web application to run meta-analyses

Language: R - Size: 152 KB - Last synced at: 18 days ago - Pushed at: 10 months ago - Stars: 5 - Forks: 1

ShixiangWang/metawho

:package: An R package implementing deft approach for meta analysis

Language: R - Size: 847 KB - Last synced at: 1 day ago - Pushed at: over 5 years ago - Stars: 7 - Forks: 1

MathiasHarrer/MetaPsyR

MetaPsyR: Access the Meta-Analytic Psychotherapy Database

Language: R - Size: 63.5 KB - Last synced at: 13 days ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 1

MathiasHarrer/metapsyTools

Read-only repository for the package "metapsyTools". [DEPRECATED]

Language: R - Size: 6.88 MB - Last synced at: 13 days ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 0

kylehamilton/JamoviMeta

Meta-Analysis for JAMOVI

Language: R - Size: 7.72 MB - Last synced at: 18 days ago - Pushed at: over 7 years ago - Stars: 12 - Forks: 4

miyamot0/scarf-ui

The SCARF-UI is an extension of the SCARF review tool for appraising results from single-case experimental designs (SCEDs)

Language: TypeScript - Size: 1.09 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

rmetaverse/metaverse

Package to provide consistent evidence synthesis workflow in R

Language: R - Size: 5.56 MB - Last synced at: 5 months ago - Pushed at: almost 5 years ago - Stars: 52 - Forks: 10

ccrisc/metaAnalysis

A meta-analysis whether an increase in minimum wage compress wage inequality.

Language: R - Size: 59.6 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0