GitHub topics: dropseq
Hoohm/CITE-seq-Count
A tool that allows to get UMI counts from a single cell protein assay
Language: Python - Size: 802 KB - Last synced at: 25 days ago - Pushed at: about 2 months ago - Stars: 82 - Forks: 45
BIMSBbioinfo/pigx_scrnaseq
Pipeline for analysis of Dropseq single cell data
Language: Python - Size: 11.2 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 10 - Forks: 6
Hoohm/dropSeqPipe
A SingleCell RNASeq pre-processing snakemake workflow
Language: Python - Size: 6.74 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 146 - Forks: 45
JulianSpagnuolo/adtseq
adtseq provides simple Rcpp methods to identify Antibody-Derived-Tags in single cell CITE/REAP-seq data
Language: C++ - Size: 69.3 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0
gambalab/dropseq
Pipeline to process DROP-seq data
Language: Java - Size: 43.3 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 4
BIMSBbioinfo/pigx
Pipelines in genomics
Language: HTML - Size: 182 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 18 - Forks: 5
dibbelab/singlecell_bcatlas
Breast Cancer Single Cell Atlas
Size: 2.57 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 7 - Forks: 4
ComputationalSystemsBiology/Single-cell-RNA-seq
Workflows for handling automatic single-cell RNA seq analysis
Language: Java - Size: 8.78 MB - Last synced at: 8 months ago - Pushed at: almost 7 years ago - Stars: 8 - Forks: 0
GwangWooKim/SBC-analysis
SBC analysis with DIGIST (In progress)
Language: R - Size: 10.8 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
