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GitHub topics: genome-scale

zimmmermann-kogadeeva-group/GEMsembler

GEMsembler tool for assembling and comparing several types of Genome-Scale Metabolic Models (GEMs)

Language: Python - Size: 5.89 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 4 - Forks: 0

cdanielmachado/carveme

CarveMe: genome-scale metabolic model reconstruction

Language: Python - Size: 121 MB - Last synced at: 11 days ago - Pushed at: 20 days ago - Stars: 165 - Forks: 58

MetExplore/miom

Constraint-based modeling of metabolism using Mixed Integer Optimization

Language: Python - Size: 1020 KB - Last synced at: 27 days ago - Pushed at: 7 months ago - Stars: 11 - Forks: 2

findCP/findCPcli

findCP CLI package - find ChokePoint reactions in genome-scale metabolic models

Language: Python - Size: 5.6 MB - Last synced at: 16 days ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0