Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: genome-scale-metabolic-model
c-mayer/ECMproject
ECMproject is a standalone python program, which enumerates Elementary Conversion Modes (ECMs) of metabolic models.
Language: Jupyter Notebook - Size: 4.68 MB - Last synced: 13 days ago - Pushed: 14 days ago - Stars: 0 - Forks: 0
zimmmermann-kogadeeva-group/GEMsembler
GEMsembler tool for assembling and comparing several types of Genome-Scale Metabolic Models (GEMs)
Language: Python - Size: 5.45 MB - Last synced: 14 days ago - Pushed: 16 days ago - Stars: 3 - Forks: 0
Matteopaluh/KEMET
KEGG Module Evaluation Tool
Language: Python - Size: 178 MB - Last synced: 9 days ago - Pushed: 6 months ago - Stars: 22 - Forks: 5
rcolpo/pgp_reconstruction
Pathway-Guided Pruning Reconstruction of Genome-Scale Metabolic Models
Language: Python - Size: 4.76 MB - Last synced: 16 days ago - Pushed: 6 months ago - Stars: 11 - Forks: 0
Robaina/Phycogem
Modeling phycospheric metabolic interactions in python
Language: Python - Size: 48 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
franciscozorrilla/metaGEM
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
Language: Python - Size: 262 MB - Last synced: 3 months ago - Pushed: 4 months ago - Stars: 160 - Forks: 34
draeger-lab/C_striatum_GEMs
This repository contains all changes made to the strain specific models of Corynebacterium striatum.
Language: HTML - Size: 67.5 MB - Last synced: 6 months ago - Pushed: 7 months ago - Stars: 1 - Forks: 0
nmendozam/masterThesis
Computational modeling of a human astrocyte with multi-omic data
Language: MATLAB - Size: 35 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
