GitHub topics: integrative-modeling
haddocking/haddock3
Official repo of the modular BioExcel version of HADDOCK
Language: Python - Size: 561 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 158 - Forks: 46
amjjbonvin/haddocking.github.io Fork of haddocking/haddocking.github.io
Webpage of the HADDOCK group
Language: HTML - Size: 882 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0
haddocking/haddocking.github.io
Webpage of the Bonvinlab @ Utrecht University and HADDOCK software
Language: HTML - Size: 899 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 13 - Forks: 20
ihmwg/python-ihm
Python package for handling IHM mmCIF and BinaryCIF files
Language: Python - Size: 3.56 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 16 - Forks: 8
salilab/imp
The Integrative Modeling Platform
Language: C++ - Size: 227 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 76 - Forks: 31
salilab/pmi
Python Modeling Interface
Language: Python - Size: 80 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 13 - Forks: 11
ihmwg/IHMCIF
📖 mmCIF support for hybrid/integrative models
Language: Shell - Size: 57.5 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 22 - Forks: 3
xroi/HS-AFM-Simulation
A model of high speed atomic force microscopy, based on density maps from IMP's Nuclear Pore Complex Transport module.
Language: Jupyter Notebook - Size: 4.12 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0
haddocking/haddock-tools
Set of useful HADDOCK utility scripts
Language: Python - Size: 244 KB - Last synced at: about 2 months ago - Pushed at: 9 months ago - Stars: 51 - Forks: 19
salilab/rmf
The library to support reading and writing of RMF files.
Language: C++ - Size: 36.2 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 8 - Forks: 0
integrativemodeling/Complement
Human complement modeling
Language: Python - Size: 55.8 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
integrativemodeling/nup84
Modeling of the Nup84 subcomplex of the Nuclear Pore Complex
Language: Python - Size: 666 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 1
integrativemodeling/pol_ii_g
Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1
Language: Python - Size: 21.8 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 2
integrativemodeling/nup82
Modeling of the Nup82 subcomplex of the Nuclear Pore Complex
Language: Python - Size: 206 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0
integrativemodeling/mediator
Modeling of the yeast Mediator complex
Language: Python - Size: 338 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/imp_valgrind_tutorial
Tutorial on debugging IMP code with Valgrind
Language: CMake - Size: 65.4 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/imp_using_cpp_tutorial
Tutorial on using IMP as a library in other C++ projects
Language: CMake - Size: 55.7 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/imp_coding_tutorial
Introduction to writing IMP code
Language: Python - Size: 170 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/foxs_tutorial
Tutorial for fitting against SAXS data using FoXS and MultiFoXS
Language: Jupyter Notebook - Size: 335 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/cross_linking_tutorial
Introduction to working with cross-linking data using IMP
Language: Jupyter Notebook - Size: 5.32 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0
salilab/imp_tutorial
Tutorial that demonstrates the modeling of RNA Polymerase II using Electron Microscopy density and chemical crosslinks
Language: Python - Size: 138 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 3 - Forks: 5
salilab/imp_deposition_tutorial
Introduction to depositing IMP models in PDB-IHM
Language: Jupyter Notebook - Size: 4.3 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/actin_tutorial
IMP/PMI tutorial, modeling the complex of actin and tropomodulin-gelsolin chimera
Language: Python - Size: 405 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
salilab/profiling_tutorial
Tutorial on CPU profiling of IMP code using Google's gperftools
Size: 179 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
salilab/imp_brownian_dynamics_tutorial
Tutorial for running Brownian dynamics simulations using IMP
Language: Jupyter Notebook - Size: 171 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 1
integrativemodeling/ecm29
Regulation of 26S proteasome via interaction with Ecm29
Language: Python - Size: 10.8 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
salilab/itcell-lib
Integrative T-cell epitope prediction
Language: Perl - Size: 4.59 MB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0
salilab/rmf_chimerax
ChimeraX plugin to read and visualize RMF files
Language: Python - Size: 74.2 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0
Fluorescence-Tools/IMP.bff
IMP's Bayesian Fluorescence Framework
Language: C++ - Size: 22.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
integrativemodeling/tfiih
Modeling of the TFIIH complex using chemical cross-links and electron microscopy (EM) density maps
Language: Python - Size: 148 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
integrativemodeling/sea
Modeling of the SEA complex
Language: HTML - Size: 27.8 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1
integrativemodeling/26S-PIPs
Modeling the structures of complexes between the 26S proteasome and proteasome interacting proteins
Language: Python - Size: 3.76 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
Altairch95/PICT-MODELLER
Scripts to estimate distances from PICT
Language: Python - Size: 167 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
