GitHub topics: ion-mobility-spectrometry
theGreatHerrLebert/rustims
A Framework for IMS-MS Raw Data Processing written in Rust and Python.
Language: Rust - Size: 79.8 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 12 - Forks: 2
YuAirLab/full_dia
Full-DIA is a freely available software for single-cell diaPASEF data analysis that leverages deep learning to improve proteome coverage, quantitative accuracy and analysis speed. Most notably, Full-DIA is the first to automatically generate a missing-value-free protein matrix under global FDR control.
Language: Jupyter Notebook - Size: 8.79 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 0 - Forks: 0
theGreatHerrLebert/ionmob
An open-source prediction framework for peptide ion collision cross section (CCS) values with python.
Language: Python - Size: 210 MB - Last synced at: 3 days ago - Pushed at: almost 2 years ago - Stars: 15 - Forks: 3
mitkeng/SEER
Gas phase molecular charge state predictor
Language: Jupyter Notebook - Size: 1.03 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 2 - Forks: 0
YuAirLab/beta_dia
Beta-DIA is a partially open-source, free-to-use Python software that provides comprehensive peptide/protein identification and accurate quantification results for single-shot diaPASEF data.
Language: Python - Size: 9.36 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 1
mitkeng/peas
A user-friendly application for precise conformation sampling
Size: 1.75 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0
PNNL-m-q/mza
Software to convert multidimensional MS data from files in proprietary vendor formats to HDF5 format in the simple MZA data structure.
Language: Python - Size: 145 MB - Last synced at: 9 months ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 2
pnnl/IonToolPack
A software tool for omics-agnostic automated quality control of mass spectrometry data.
Language: Python - Size: 687 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1
EMSL-Computing/IonToolPack
A software tool for omics-agnostic automated quality control of mass spectrometry data.
Language: Python - Size: 460 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
jbellamycarter/ciuGUI
A simple GUI tool for comparing two CIU datasets
Language: Python - Size: 101 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
EMSL-Computing/PeakDecoder
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
Language: R - Size: 243 MB - Last synced at: 9 months ago - Pushed at: about 2 years ago - Stars: 13 - Forks: 5
EMSL-Computing/CCSz-demo
Python and R scripts with examples demonstrating the conversion of IM-MS raw data to CCS/z space.
Language: Python - Size: 5.29 MB - Last synced at: 9 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
theGreatHerrLebert/proteolizard-algorithm
prototype machine-learning solutions for high-throughput MS with ease
Language: Python - Size: 1020 KB - Last synced at: 2 months ago - Pushed at: about 2 years ago - Stars: 6 - Forks: 1
bhclowers/OS-IMS
Open Source Ion Mobility Spectrometer
Size: 65.3 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 12 - Forks: 5
Lily-M32/Ion-Mobility-FileReader
A .d File Reader for Agilent 6560 Ion-Mobility Files. Capable of Polygon Selection and Batch Processing.
Language: C# - Size: 10.7 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
