GitHub topics: kmer-composition
BioJulia/KmerAnalysis.jl
K-mer counting algorithms and count-data utilities for the BioJulia framework
Language: Julia - Size: 5.4 MB - Last synced at: 6 days ago - Pushed at: about 2 years ago - Stars: 11 - Forks: 5
navjindervirdee/Genome-Sequencing
Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.
Language: Java - Size: 16.6 KB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 8 - Forks: 3
ArthurVM/TreeMer
A simple tool to generate hierarchical clustering trees from nucleotide sequences. Supports a number of distance metrics and clustering algorithms. Includes a large testset of SARSCOV2 genomes.
Language: Python - Size: 753 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 1
alexpreynolds/kmer-boolean
Test if a kmer is or is not in a set of sequences
Language: C++ - Size: 251 KB - Last synced at: 3 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
