Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: metaproteomics
byemaxx/MetaX
A novel tool for linking peptide sequences with taxonomic and functional information in Metaproteomics.
Language: Python - Size: 73.2 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 1 - Forks: 0
cmkobel/mspipeline1
🪆🦖 A snakemake wrapper around Nesvilab's FragPipe-CLI. In a perfect world, this pipeline was based on Sage.
Language: Python - Size: 1.78 MB - Last synced: 27 days ago - Pushed: 28 days ago - Stars: 1 - Forks: 0
muzafferarikan/gNOMO2
gNOMO2 allows integrated multi-omics analyses of microbiomes
Language: Python - Size: 1.31 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 1
iquasere/MOSCA
Meta-Omics Software for Community Analysis
Language: Python - Size: 441 MB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 32 - Forks: 4
iquasere/KEGGCharter
A tool for representing genomic potential and transcriptomic expression into KEGG pathways
Language: Python - Size: 519 MB - Last synced: about 2 months ago - Pushed: 5 months ago - Stars: 43 - Forks: 6
compomics/meta-proteome-analyzer
MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.
Language: TSQL - Size: 607 MB - Last synced: about 2 months ago - Pushed: almost 4 years ago - Stars: 24 - Forks: 10
compomics/pout2prot
Pout2Prot converts Percolator output files to protein group and subgroup files using Occam's razor or anti-Occam's razor. These output files can directly be used in Prophane for further downstream taxonomic and functional analysis
Language: Python - Size: 37.4 MB - Last synced: 10 days ago - Pushed: over 2 years ago - Stars: 5 - Forks: 1
johanneswerner/mPies
mPies: metaProteomics in environmental sciences
Language: Python - Size: 7.68 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 6 - Forks: 2
unipept/unipept-cli
Unipept command line interface
Language: Ruby - Size: 10.8 MB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 5 - Forks: 2
xyz1396/SiprosToolKits-Sipros4
tools collection of Sipros for stable isotopic mass spectrum meta proteomic research
Language: C - Size: 6.49 MB - Last synced: 7 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0
KevinMcDonnell6/chordomics
Interactive visualisation and data annotation for meta-omics data
Language: R - Size: 69.4 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 7 - Forks: 4
unipept/unipept
A Ruby on Rails application for proteomics data analysis
Language: Vue - Size: 116 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 23 - Forks: 4
Biocomputing-Research-Group/FDR
A fast and accurate fine-grained taxonomy-specific FDR assessment tool
Language: Python - Size: 94.1 MB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 3 - Forks: 0
northomics/pepFunk
Peptide-centric functional enrichment tool
Language: R - Size: 18.5 MB - Last synced: over 1 year ago - Pushed: about 2 years ago - Stars: 4 - Forks: 2
