wennj/plasmid-collapse-gene-loss-unicycler-galaxy

Accompanying information to a scientific publication on the assembly of bacterial genomes using Illumina and nanopore sequencing data using Unicylcer.

Language: R - Size: 13.3 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

coadunate/MICAS

MinION Classification & Alerting System

Language: TypeScript - Size: 61.8 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 1

vhfsantos/MGEcatcher

Automated detection of unfixed mobile genetic elements in long read DNA sequencing data

Language: Shell - Size: 1.33 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

emiliomastriani/Vir-MinION

Pipeline for 3rd Generation sequencing data from MinION

Language: Shell - Size: 48 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 1

Gogis0/barcluster

Clustering DNA reads by barcodes from squiggles.

Language: Python - Size: 85 KB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

ChristopheVdE/Minion-Illumina-pipeline 📦

Language: Python - Size: 262 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

nmiculinic/minion-basecaller

Repo for Mincall - MinION basecaller we're working on during academic year 2016/2017.

Language: Jupyter Notebook - Size: 13.8 MB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 9 - Forks: 1

mjoppich/sequ-into Fork of igemsoftware2018/igem_munich_2018

Third generation sequencing techniques rapidly evolved as a common practice in molecular biology. Great advances have been made in terms of feasibility, cost, throughput, and read-length. However, sample contamination still poses a big issue: it complicates correct, high-quality downstream analysis of sequencing data and usage in medical applications. Furthermore, it might be unclear weather the sequenced reads represent the intended target. To address these issues we developed a cross-platform desktop application: Sequ-Into.

Language: TypeScript - Size: 42 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 1

DrQuestion/monica

MinION Open-source Nucleotide Identifier for Continuous Analysis - Software for MinION sequencing quantitative metagenomic analysis in real time

Language: Python - Size: 112 KB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 5 - Forks: 0