GitHub topics: molecular-clock
YuLab-SMU/shinyTempSignal
Explore Temporal and Other Phylogenetic Signals
Language: R - Size: 1.28 MB - Last synced at: 19 days ago - Pushed at: about 1 year ago - Stars: 9 - Forks: 7
clockor2/clockor2
Inferring global and local strict molecular clocks using root-to-tip regression
Language: TypeScript - Size: 61.1 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 11 - Forks: 0
j3551ca/BEAST-FLOW
Nextflow pipeline for estimation of evolutionary rate using Bayesian statistics.
Language: Nextflow - Size: 314 KB - Last synced at: 11 months ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1
cbg-ethz/scSomMerClock
Test for a molecular clock based on the phylogenetic tree inferred from single-cell DNA sequenzing data
Language: Python - Size: 2.21 MB - Last synced at: 10 days ago - Pushed at: almost 2 years ago - Stars: 6 - Forks: 0
laduplessis/Treponema_pallidum_in_early_modern_Europe
Data and scripts to reproduce the molecular clock dating analyses presented in "Ancient bacterial genomes reveal a formerly unknown diversity of Treponema pallidum strains in early modern Europe (Majander et al.)
Language: Python - Size: 48.1 MB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
FernandoMarcon/PKS-Test
The PKS Test software was designed to directly verify whether a phylogeny is clock-like following a Poisson law.
Language: Terra - Size: 519 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
sabifo4/morpho
Methods for the analyses described in Álvarez-Carretero, et al. 2019 (https://doi.org/10.1093/sysbio/syz015)
Language: R - Size: 2.57 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0
