GitHub topics: omero-import
ome/omero-cli-transfer
An OMERO CLI plugin for creating transfer packets between OMERO servers.
Language: Python - Size: 2.97 MB - Last synced at: 6 days ago - Pushed at: 13 days ago - Stars: 17 - Forks: 15
WU-BIMAC/W-IDM_OmeroImporterExcelHelperPy
This repository contains Python software that was created to explore file system directories and automatically collect the names of image data files to be annotated with experimental and sample preparation metadata and imported into OMERO.
Language: Python - Size: 603 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 1
German-BioImaging/omero_fileserver-import
Script to import images from fileserver mounted on an OMERO server
Language: Jupyter Notebook - Size: 206 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 5 - Forks: 0
ome/omero-dropbox
OMERO.dropbox server for watching directories
Language: Python - Size: 453 KB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 1 - Forks: 6
WU-BIMAC/W-IDM_OmeroImporter
This repository contains software that was developed for the management of bioimage data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.
Language: Java - Size: 10.2 MB - Last synced at: 7 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1
TheJacksonLaboratory/jax-omeroutils
A module and scripts for working with OMERO
Language: Python - Size: 186 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 6 - Forks: 3
WU-BIMAC/W-IDM_OmeroImporterPy
This repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMERO
Language: Python - Size: 103 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 3 - Forks: 0
Qureator/omero-acquisition-transfer
"omero-acquisition-transfer" provides the ability to easily move data between omero servers by packing and unpacking acquisition metadata.
Language: Python - Size: 69.3 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
imcf/hrm-omero
The HRM-OMERO connector
Language: Python - Size: 497 KB - Last synced at: 17 days ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0
centuri-engineering/impomero
Omero auto importer
Language: Python - Size: 538 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
juliomateoslangerak/ome-smuggler Fork of jburel/ome-smuggler
Sneakily imports image goodies into OMERO without paying MRI session duties.
Size: 1.65 MB - Last synced at: almost 2 years ago - Pushed at: about 9 years ago - Stars: 0 - Forks: 0
WU-BIMAC/W-IDM_OmeroDataWriter
This repository contains sofware that was created for the automatic image data management of image data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.
Language: Java - Size: 43.9 KB - Last synced at: 7 days ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 0
warwickcamdu/OMEROimport Fork of Laura190/OMEROimport
Commands used to set up automatic imports to OMERO from microscopes
Language: Shell - Size: 61.5 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 0
TheJacksonLaboratory/jax-omero-transfer
Transfer OMERO datsets from the Research server to the Public server.
Language: Python - Size: 113 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 1
centuri-engineering/cataloger
Filling form for microscopy image annotations (on the biology side of things)
Language: Python - Size: 413 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0