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GitHub topics: parallel-cluster

Daylily-Informatics/daylily

A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0.998.

Language: WDL - Size: 297 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 23 - Forks: 2

Daylily-Informatics/snakemake-executor-plugin-pcluster-slurm-ref Fork of snakemake/snakemake-executor-plugin-slurm

A Snakemake executor plugin for submitting jobs to a SLURM cluster

Language: Python - Size: 168 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

Related Keywords
aws 2 snakemake 2 slurm 2 parallel-cluster 2 snakemake-plugin 1 plugin 1 pcluster 1 aws-parallel-cluster 1 wgs 1 snv-call 1 scaling 1 scalable 1 ngs 1 informatics 1 human-genome 1 giab 1 genomic-data-analysis 1 ephemeral 1 ec2 1 cwl 1 budgeting 1 bioinformatics-pipeline 1 bioinformatics 1