GitHub topics: scientific-software
data-exp-lab/deepgit
Promoting Exploration and Discovery of Research Software with Human-Curated Graphs
Language: TypeScript - Size: 11.8 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 4 - Forks: 1
CenterForOpenScience/community
This repository contains all community documentation for contributing to our open-source projects, including guidelines, workflows, and resources to help new and returning contributors collaborate effectively in support of open science and reproducible research.
Size: 79.1 KB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 6 - Forks: 3
aimclub/OSA
Tool that just makes your open source project better using LLM agents
Language: Python - Size: 27.6 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 58 - Forks: 4
easybuilders/easybuild-framework
EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.
Language: Python - Size: 56 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 157 - Forks: 209
easybuilders/easybuild-easyblocks
Collection of easyblocks that implement support for building and installing software with EasyBuild.
Language: Python - Size: 17.9 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 110 - Forks: 291
stfbnc/fathon
python package for DFA (Detrended Fluctuation Analysis) and related algorithms
Language: Cython - Size: 11.7 MB - Last synced at: about 6 hours ago - Pushed at: 5 months ago - Stars: 128 - Forks: 22
easybuilders/easybuild-easyconfigs
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
Language: Python - Size: 102 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 411 - Forks: 734
openjournals/joss
The Journal of Open Source Software
Language: Ruby - Size: 29.5 MB - Last synced at: 4 days ago - Pushed at: 13 days ago - Stars: 1,652 - Forks: 188
aeye-lab/pymovements
A python package for processing eye movement data
Language: Python - Size: 3.87 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 92 - Forks: 28
easybuilders/easybuild
EasyBuild - building software with ease
Language: Shell - Size: 585 MB - Last synced at: 3 days ago - Pushed at: 6 days ago - Stars: 488 - Forks: 144
omelchert/SWtools
Iterative solvers for solitary wave solutions of nonlinear Schrödinger-type equations
Language: Python - Size: 2.55 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 0 - Forks: 0
FredHutch/easybuild-life-sciences
Howto and implementation documentation
Language: C++ - Size: 276 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 22 - Forks: 6
JuliaHealth/Thunderbolt.jl
A modular shared-memory high-performance framework for multiscale cardiac multiphysics simulations.
Language: Julia - Size: 11.5 MB - Last synced at: 11 days ago - Pushed at: 16 days ago - Stars: 21 - Forks: 3
sdsc-ordes/gimie
Extract linked metadata from repositories
Language: Python - Size: 3.17 MB - Last synced at: 18 days ago - Pushed at: 6 months ago - Stars: 11 - Forks: 2
usnistgov/oar-pdr-py
Python Components for the The NIST Open Access to Research (OAR) Public Data Repository (PDR) system
Language: Python - Size: 3.32 MB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 5 - Forks: 5
braph-software/BRAPH-2
BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.
Language: MATLAB - Size: 1.12 GB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 47 - Forks: 13
proycon/labirinto 📦
A web front-end portal for a virtual laboratory of NLP tools
Language: Vue - Size: 2.35 MB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0
omelchert/pyGLLE
Python package for temporal evolution of initial conditions under the generalized Lugiato-Lefever equation
Language: Python - Size: 1.71 MB - Last synced at: 24 days ago - Pushed at: over 2 years ago - Stars: 18 - Forks: 10
gage1145/quicR
Open-source R toolkit for RT-QuIC data analysis
Language: R - Size: 23.1 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 1 - Forks: 0
SoftwareUnderstanding/SOMEF-Vider
Web application for displaying the contents automatically retrieved from a code repository by applying the Software Metadata Extraction Framework (SOMEF)
Language: Vue - Size: 5.73 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 7 - Forks: 2
usnistgov/dimspec
The Database Infrastructure for Mass Spectrometry (DIMSpec) project
Language: R - Size: 331 MB - Last synced at: about 2 months ago - Pushed at: 2 months ago - Stars: 24 - Forks: 14
cdpxe/NetworkCovertChannels
Some network covert channel projects of my own research, containing a protocol channel tool (protocol switching covert channel, PCT/PSCC), a protocol hopping covert channel (PHCC) tool, the protocol channel-aware active warden (PCAW) and ... VSTT.
Language: C - Size: 394 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 16 - Forks: 5
adamspierer/FreeClimber
FreeClimber is a background-subtracting particle detection platform designed to quantify group climbing performance in a Drosophila negative geotaxis (climbing) assay
Language: Python - Size: 104 MB - Last synced at: 14 days ago - Pushed at: about 1 year ago - Stars: 17 - Forks: 6
carboncopies/BrainEmulationChallenge
[Mirror of https://gitlab.braingenix.org/carboncopies/] The Brain Emulation Challenge aims to overcome a main hurdle of current neurscience by generating standardized reference brain tissue with fully understood neural circuit structure and their functional representations.
Language: Python - Size: 6.11 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0
joelb123/joelb123.github.io
Current Opinions of Joel Berendzen
Language: HTML - Size: 16.7 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
Mulan-94/mulan-94.github.io
Personal website
Language: HTML - Size: 10.2 MB - Last synced at: 11 days ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
dgdzd/DataMorph
A better alternative to the old and ugly software named Regressi
Language: C++ - Size: 25.4 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0
Moryavendil/limrendir
Saves a video stream from genicam-compatible cameras with minimal frame loss. Allows for realtime camera control and video stream visualization using the Aravis library.
Language: C - Size: 314 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0
NWChemEx/PluginPlay
An inversion-of-control framework for developing modular scientific software.
Language: C++ - Size: 44.8 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 11 - Forks: 2
NIEHS/Scientific-Developers-Guide
Guide for scientific developers to help them navigate analyzing data, creating scientific applications, and publishing.
Language: JavaScript - Size: 6.67 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
Schrausser/Ip
Inferential permutation methods Ip (beta version).
Language: C - Size: 186 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
xsdk-project/xsdk-community-policies
Contains the xSDK community policies. The master branch is the latest accepted version of the policies and will be applied to future xSDK releases. See the releases page for tags corresponding to the current and past xSDK releases.
Size: 649 KB - Last synced at: 2 months ago - Pushed at: 12 months ago - Stars: 10 - Forks: 8
blleng/convert-emd
A tool for exporting data from EMD (Velox) files
Language: Python - Size: 65.4 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
AngryMaciek/efcomp
Advanced methods for efficient scientific computing in Python/R/C++
Language: Jupyter Notebook - Size: 298 KB - Last synced at: 6 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
stfbnc/pytvfemd
Python implementation of time varying filter EMD
Language: Python - Size: 302 KB - Last synced at: 10 months ago - Pushed at: about 1 year ago - Stars: 11 - Forks: 4
Hyle-Co/hyle-co.github.io
Hyle Company Website
Language: HTML - Size: 604 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
ecyoung3/FRHEED
A program for real-time Reflection High Energy Electron Diffraction (RHEED) analysis.
Language: Python - Size: 178 MB - Last synced at: 10 months ago - Pushed at: 12 months ago - Stars: 17 - Forks: 7
StefanoAnzolut/writing-assistant
Text and speech-based writing assistance prototype for users with a visual impairment
Language: Vue - Size: 450 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
katrinleinweber/171228-34c3-lightning-software-citation
Lightning talk at 34c3: Closing The Gaps In The Software Citation Workflow. Video (ca 10min in):
Language: TeX - Size: 2.03 MB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 3 - Forks: 0
RedMageP42/IonFit
This repository contains the IonFit software and all the files related to it. IonFit is a python code meant to perform VTF and Walden analysis on electrolyte systems for batteries
Language: Python - Size: 18.6 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
giovannivolpe/BRAPH-2-Matlab-beta Fork of braph-software/BRAPH-2
BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.
Language: MATLAB - Size: 933 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
Ardark27/SSKG
Scientific Software Knowledge Graphs
Language: Jupyter Notebook - Size: 15.7 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 3
sajed-zarrinpour/Scientific-Software-Installation-Scripts
Installation Instructions for Scientific Software
Language: Shell - Size: 7.81 KB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
philipptempel/CASPR Fork of darwinlau/CASPR
Cable-robot Analysis and Simulation Platform for Research Open-Source Software
Language: MATLAB - Size: 81.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
TIBHannover/FAIR-studyGroup 📦
FAIR data and software for students, scientists and librarians at TIB, LUH, etc. (contact: @katrinleinweber)
Language: JavaScript - Size: 3.07 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 5 - Forks: 7
stfbnc/mtsa_2_14
Multistep Time series Analysis in MATLAB
Language: MATLAB - Size: 18.6 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 1
stfbnc/perl_scripts
My perl scripts.
Language: Perl - Size: 3.91 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
stfbnc/mtsa_py
Multistep Time series Analysis in Python
Language: Python - Size: 4.19 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
stfbnc/latex_flowchart
MTsA flowchart.
Language: TeX - Size: 22.5 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
stfbnc/FATool
Fluctuation Analysis Tool: macOS and Ubuntu app for detrended fluctuations analysis and related algorithms, and plots of the results
Language: C++ - Size: 86.7 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1
stfbnc/cufathon
CUDA implementation of fathon
Language: Cuda - Size: 897 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1
stfbnc/C_fa
Fluctuation analysis C scripts.
Language: C - Size: 58.6 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
ERGpy/ERGpy
An automated electroretinogram analysis software.
Language: Python - Size: 1.78 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
omelchert/GNLStools
Data structures and functions for simulation and analysis of the propagation dynamics of laser pulses in nonlinear waveguides
Language: Python - Size: 3.77 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 2
fronchetti/SANER-2018
📄 Replication Package: How Scientists Develop Scientific Software
Language: PostScript - Size: 7.72 MB - Last synced at: 3 months ago - Pushed at: about 5 years ago - Stars: 6 - Forks: 3
omelchert/optfrog
Analytic signal spectrograms with optimized time-frequency resolution
Language: Python - Size: 1.81 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 8
FisicaTre/gwas_tools
adaptive scattering recognizer tool for gravitational waves detector characterization
Language: Python - Size: 688 KB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
DannyVanpoucke/HIVE4-tools
Post-processing tool-set for ab-intio calculations using VASP.
Size: 574 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1
erexer/nbdev_intro
intro / demo of nbdev
Language: Python - Size: 67.9 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
R-Mosolov/history-gd
«The History of Genius Discovery» is the full-stack web application for keeping Russian scientific manuscripts and searching genius patterns based on big data. Technological stack: TypeScript, React.js, Material UI, Redux, GraphQL, Node.js, Express.js.
Language: TypeScript - Size: 5.83 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
ScottishCovidResponse/modelling-software-checklist
A checklist to help developers of modelling software assess and communicate their level of confidence in the software implementation and its readiness to yield trustworthy results.
Size: 20.5 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 4
DannyVanpoucke/NortonDomeExplorer
GUI program to explore the behavior of a mass on a Norton Dome.
Language: Pascal - Size: 14.3 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1
ohadmich/Scientific-Tools
This repository contains some useful scientific functions that I created for my daily research work.
Language: Python - Size: 1.17 MB - Last synced at: about 2 years ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 0
gramian/awesome-scisoft
A curated list of awesome scientific software
Size: 1.95 KB - Last synced at: 26 days ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
joaomcteixeira/Tree-of-Life
A Python-written and stand-alone library to setup Python-based user-oriented scientific projects.
Language: Python - Size: 1.36 MB - Last synced at: about 2 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
