An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: spike-detection

HelmchenLabSoftware/Cascade

Calibrated inference of spiking from calcium ΔF/F data using deep networks

Language: Jupyter Notebook - Size: 463 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 144 - Forks: 43

revunix/PingMonitor

Intelligent network latency monitoring script with spike detection and Telegram notifications. Supports German and English languages.

Language: Shell - Size: 33.2 KB - Last synced at: 13 days ago - Pushed at: 23 days ago - Stars: 0 - Forks: 0

LiuLab-Bioelectronics-Harvard/SpikeAgent

SpikeAgent is a multimodal LLM-based AI agent that automates and standardizes the spike sorting pipeline

Language: Python - Size: 221 MB - Last synced at: 19 days ago - Pushed at: 2 months ago - Stars: 47 - Forks: 3

ajayarunachalam/pynmsnn

NeuroMorphic Predictive Model with Spiking Neural Networks (SNN) using Pytorch

Language: Jupyter Notebook - Size: 1.65 MB - Last synced at: 9 days ago - Pushed at: over 2 years ago - Stars: 31 - Forks: 7

RezaSaadatyar/Neurophysiological-Signal-Processing-and-Analysis

This repository contains extensive tools and scripts for processing and analyzing neurophysiological signals. The primary focus is on various critical aspects of neurophysiological data handling, including spike detection, feature extraction, clustering, and firing rate analysis.

Language: MATLAB - Size: 25.2 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0

akcarsten/spike_sorting

Python implementation of signal processing techniques and K-means clustering to sort spikes.

Language: Jupyter Notebook - Size: 1.44 MB - Last synced at: 2 months ago - Pushed at: about 6 years ago - Stars: 83 - Forks: 37

PTRRupprecht/Quantal-analysis-for-spike-inference

Quantal analysis for autocalibration of inferred spike rates from calcium imaging

Language: MATLAB - Size: 563 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

nghorbani/NeuralDataAnalysis

Download Data from https://bit.ly/3g8RUmi

Language: Matlab - Size: 2.8 MB - Last synced at: about 2 months ago - Pushed at: almost 8 years ago - Stars: 6 - Forks: 5

mhhennig/HS2

Software for high density electrophysiology

Language: Jupyter Notebook - Size: 44.4 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 26 - Forks: 17

firelord97/Spike-Detection-using-Neural-Nets

Neural network-based approach for detecting spikes in high-density neural data using Multi-Layer Perceptron models

Size: 1.72 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

michaela10c/neural_spike_detection

Python Jupyter notebook for Neuralink Patent No. US 2021/0012909 A1, titled "Real-Time Neural Spike Detection"

Language: Jupyter Notebook - Size: 159 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

ydecastro/super-resolution-testing

Testing procedures for Super-Resolution, i.e. testing spikes from low frequency measurements.

Language: Jupyter Notebook - Size: 192 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 1

ramintoosi/ROSS

Robust Offline Spike Sorter

Language: MATLAB - Size: 83.7 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 120 - Forks: 2

tbrouns/paser

PASER: Processing and Analysis Schemes for Extracellular Recordings

Language: Matlab - Size: 1010 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 3

lkct/hs-detection

Optimized spike detection based on https://github.com/mhhennig/HS2

Language: C++ - Size: 6.35 MB - Last synced at: 10 days ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 5

konstantd/Biomedical_Engineering

Digital Signal Processing in Electroencephalography signals. Spike detection with threshold method and isolation with windowing. Temporal and spectral feature extraction. Classification in three neurons.

Language: MATLAB - Size: 125 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

gavinmischler/spikeFRInder

Spike inference algorithm using frequency-domain FRI framework

Language: Jupyter Notebook - Size: 318 KB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

W-orko/NSpike

MATLAB GUI to identify, extract and analyze neural electrode data for action potentials by isolating neural spikes from noise.

Language: MATLAB - Size: 4.88 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0

marinimau/Spike-detection-for-cooking-activity-recognition-based-on-indoor-air-quality-sensor

Lo scopo dell'applicazione è quello di costruire un feature vector per la predizione dei pasti in base a valori registrati da sensori di qualità dell'aria. Le feature prodotte verranno automaticamente unite a feature statistiche già presenti in alcuni files. Per la classificazione utilizzare il Knowledge Flow Enviroment di Weka impostato nel file allegato.

Language: Python - Size: 291 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

Related Keywords
spike-detection 19 spike-sorting 7 neuroscience 6 electrophysiology 4 calcium-imaging 3 spike-inference 3 python 3 multi-electrode-array 2 neural-recording 2 neuroscience-methods 2 signal-processing 2 machine-learning 2 classification 2 spike-analysis 2 extracellular-recordings 2 deep-learning 2 two-photon 2 lasso-variants 1 inference 1 indoor-air-quality 1 gaussian-process-regression 1 spike-classification 1 neuralink-patent 1 neuralink 1 iir-filters 1 forecasting 1 double-exponential-smoothing 1 butterworth-filter 1 brain-computer-interface 1 bandpass-filter 1 python3 1 neural-networks 1 multi-layer-perceptron 1 high-density-mea 1 bioinformatics 1 matplotlib 1 numpy 1 scipy 1 deep-neural-networks 1 feature-engineering 1 electroencephalography 1 toolbox 1 spikes 1 quality-control 1 local-field-potential 1 extracellular-data 1 spike-sorting-software 1 spike-sorter 1 offline-spike-sorter 1 threshold-method 1 finite-rate-of-innovation 1 testing 1 spike-trains 1 air-quality 1 superresolution 1 cooking-activity-recognition 1 statistics 1 statistical-tests 1 feature-vector 1 statistical-learning 1 spike-deconvolution 1 spacings 1 human-activity-recognition 1 biological-neural-networks 1 spike 1 braincomputerinterface 1 ai 1 agents 1 agentic-ai 1 agentic 1 agent-based-model 1 agent 1 telegram 1 sysadmin 1 shell-script 1 ping 1 notifications 1 network-tools 1 network-monitoring 1 network 1 multilingual 1 mtr 1 monitoring 1 latency 1 infrastructure 1 bash 1 deconvolution 1 spike-rate 1 matlab 1 data-analysis 1 quantal-analysis 1 clustering 1 wavelet-analysis 1 pca 1 neural-activity 1 kmeans-clustering 1 interspike-interval 1 fuzzy-c-means 1 firing-rate 1 feature-extraction 1