GitHub topics: neuroscience-methods
asoplata/open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
Size: 279 KB - Last synced at: 1 day ago - Pushed at: about 1 year ago - Stars: 596 - Forks: 91
sync2brain/bossdevice-api-matlab
sync2brain's bossdevice RESEARCH Application Programmable Interface (API) for MATLAB
Language: MATLAB - Size: 56 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 9 - Forks: 4
AdaptiveMotorControlLab/CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
Language: Python - Size: 2.16 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 974 - Forks: 85
CogPlatform/CageLab
Optimised Low-cost In-Cage Cognitive Training System
Language: MATLAB - Size: 14.8 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0
Hugo-W/pyEEG
Library for processing and analyizing M/EEG data as recorded with naturalistic stimuli.
Language: Jupyter Notebook - Size: 22.3 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 13 - Forks: 2
duodenum96/IntrinsicTimescales.jl
A Julia package to estimate Intrinsic (Neural) Timescales (INTs) from time-series data
Language: Julia - Size: 3.02 MB - Last synced at: 6 days ago - Pushed at: 7 days ago - Stars: 0 - Forks: 0
delvendahl/miniML
A deep learning framework for synaptic event detection
Language: Jupyter Notebook - Size: 233 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 13 - Forks: 6
Rainman-23/lif-qif-eif-gain-function
A python script to plot gain curves (f-i curves) of LIF, QIF and EIF neurons at different current stimulation values using Brian2
Language: Python - Size: 3.91 KB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 0 - Forks: 0
neuroinformatics-unit/derotation
Derotate images acquired via 2-photon or 3-photon calcium imaging
Language: Python - Size: 54.7 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 7 - Forks: 1
neurolib-dev/neurolib
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿🔬
Language: Python - Size: 57.5 MB - Last synced at: 13 days ago - Pushed at: 3 months ago - Stars: 430 - Forks: 89
MouseLand/rastermap
a visualization method for neural data
Language: Python - Size: 70.5 MB - Last synced at: 17 days ago - Pushed at: 20 days ago - Stars: 216 - Forks: 49
naplab/naplib-python
Tools and functions for neural data processing and analysis in python
Language: Python - Size: 259 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 25 - Forks: 9
PennLINC/CuBIDS
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
Language: Python - Size: 8.56 MB - Last synced at: 12 days ago - Pushed at: 20 days ago - Stars: 25 - Forks: 12
themattinthehatt/behavenet
Toolbox for analyzing behavioral videos and neural activity
Language: Python - Size: 95.2 MB - Last synced at: 18 days ago - Pushed at: over 1 year ago - Stars: 59 - Forks: 16
PTRRupprecht/Quantal-analysis-for-spike-inference
Quantal analysis for autocalibration of inferred spike rates from calcium imaging
Language: MATLAB - Size: 563 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
yulewang97/ERDiff
[NeurIPS'23 Spotlight] Official Repo for "Extraction and Recovery of Dpatio-temporal Structure in Latent Dynamics Alignment with Diffusion Models"
Language: Python - Size: 15.9 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 47 - Forks: 5
shlizee/NeuroAI
NeuroAI-UW seminar, a regular weekly seminar for the UW community, organized by NeuroAI Shlizerman Lab.
Size: 254 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 53 - Forks: 4
acsenrafilho/templateCreator
Shell scripts pipelines to create DTI templates
Language: Shell - Size: 87.3 MB - Last synced at: 3 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0
NIMH-SCCN/callicog
Open-source tools for automated behavioral training and testing, designed for the homecage environment.
Language: Python - Size: 7.79 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0
gomzi-star/siz
Language: Jupyter Notebook - Size: 1.14 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
braph-software/MemoryCapacity
This repository contains "Memory Capacity", a pipeline of BRAPH 2.0 software that uses the reservoir computing framework to calculate both global and regional memory capacity of a network. Reference: "Computational memory capacity predicts aging and cognitive decline" by Mijalkov et al. (2025).
Language: MATLAB - Size: 90.4 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 1
cirmuw/EvolutionOfCorticalShape
Data and tools from the publication "Evolution of Cortical Geometry and its Link to Function, Behaviour and Ecology" by Schwartz et al. for mapping values defined on cortical surfaces between species based on their phylogenetic relationship
Language: Shell - Size: 1.07 GB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 8 - Forks: 2
reiserlab/Modular-LED-Display
This repository collects many existing repositories for Modular LED Displays as submodules and generates a consistent documentation from it. Modular LED Displays are customized display systems used in neuroscientific studies. The displays were initially developed for fly vision, where temporal, spatial, and wavelength sensitivity requires specialized stimuli presentation systems.
Language: HTML - Size: 7.33 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 2
LOAMRI/asltk
The Arterial Spin Labeling (ASL) toolkit offer a general imaging processing api for ASL MRI techniques.
Language: Python - Size: 2.13 MB - Last synced at: 3 days ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
ClandininLab/flystim
Visual stimulus generator for neuroscience experiments
Language: Python - Size: 869 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 2
CohanR/CohanR.github.io
Rémy Cohan
Language: HTML - Size: 40.2 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
BlueBrain/axon-synthesis
A package to synthesize artificial axons
Language: Python - Size: 20.4 MB - Last synced at: 12 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 1
iandol/equiluminance
Perceptual Isoluminance Testing — Pupil Frequency Tagging vs. Heterochromatic Flicker vs. Minimum Motion
Language: MATLAB - Size: 30.3 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 2
fschwar4/pynamicgain
Creating Dynamic Gain inputs for Python-based patch clamp setups.
Language: Python - Size: 3.71 MB - Last synced at: 21 days ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
kevmtan/electroCUDA
Robust electrophysiology tools with GPU acceleration
Language: Cuda - Size: 256 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 14 - Forks: 0
UWB-Biocomputing/GraphSystemsAnalysis
Analysis code for understanding the activities of graph-structured systems, such as development in cultures of dissociated cortical cultures.
Language: Jupyter Notebook - Size: 60.3 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 3 - Forks: 0
ethanknights/Knightsetal2021_HAROLD-MVB
Knights et al. (2021). Does HAROLD in motor cortex reflect compensation? Journal of Neuroscience.
Language: R - Size: 2.75 MB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
neuroinformatics-unit/rsp-vision
Analysis and visualization of calcium imaging data from retrosplenial cortex
Language: Python - Size: 43.5 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 8 - Forks: 0
Brody-Lab/PulseInputDDM.jl
A Julia library for fitting DDMs to pulse-based evidence accumulations task data
Language: Julia - Size: 256 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 5 - Forks: 3
iezqrom/publication-cold-sensation-without-touch
Code & data supporting academic publication "A novel method to selectively elicit cold sensations without touch" published at Journal of Methods Neuroscience
Language: Python - Size: 83.2 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0
nomurshin/ARViS_Automated_Robotic_Virus_injection_System
ARViS is a user-friendly platform designed for neuroscience labs, streamlining automated injections into the neocortex of mice and non-human primates.
Language: MATLAB - Size: 134 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 1
jajcayn/eeg_latent_space
Accompanying code for Jajcay, N., & Hlinka, J. (2023). Towards a dynamical understanding of microstate analysis of M/EEG data. bioRxiv, 2023-04. doi: 10.1101/2023.04.09.536154
Language: Jupyter Notebook - Size: 133 MB - Last synced at: 9 days ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 2
adamjeisen/ChaoticConsciousness
Code for running the analyses from the article "Propofol destabilizies neural dynamics across cortex"
Language: Jupyter Notebook - Size: 139 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
JATOS/JATOS
Just Another Tool for Online Studies
Language: JavaScript - Size: 31.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 79 - Forks: 24
bsbrl/exoskeleton
Brain-wide neural recordings in mice navigating physical spaces enabled by a cranial exoskeleton
Language: MATLAB - Size: 231 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
kylemath/EEGEdu
Interactive Brain Playground - Browser based tutorials on EEG with webbluetooth and muse
Language: JavaScript - Size: 24 MB - Last synced at: 11 months ago - Pushed at: over 1 year ago - Stars: 166 - Forks: 35
simkind/Patch-clamp-analysis
MATLAB scripts for action potential waveform and AHP analysis of Neuronal Current-Clamp .abf files
Language: MATLAB - Size: 2.34 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
DenisPolygalov/CaFFlow
Acquisition and analysis of Ca++ imaging and behavior video streams without academic opportunism
Language: Python - Size: 566 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 2
ethanknights/Knightsetal2021_Hand-selective
Knights et al. (2022)-Scientific Reports & (2021)-Journal of Neuroscience.
Language: MATLAB - Size: 543 KB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
MaaikevS/3d-point-clouds
Repository accompanying a scientific manuscript
Language: Jupyter Notebook - Size: 2.96 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 2
bsotomayorg/SpikeShip
SpikeShip: A method for fast, unsupervised discovery of high-dimensional neural spiking patterns.
Language: Jupyter Notebook - Size: 2.49 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 13 - Forks: 2
sahahn/BPt
The Brain Predictability toolbox (BPt), is a python based Machine Learning library designed primarily for tabular and neuroimaging specific neuroimaging data but can easily be generalized further.
Language: Python - Size: 259 MB - Last synced at: 11 days ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 7
losonczylab/Grosmark_NatNeuro_2021
Replay analysis code for Grosmark et al. 2021
Language: MATLAB - Size: 727 KB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0
ropensci/tacmagic
tacmagic: PET Analysis in R
Language: R - Size: 1.79 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 1
ccli3896/RLWorms
Setting up C elegans as an RL environment.
Language: Jupyter Notebook - Size: 626 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
SD-Jiang/MorphoHub
MorphoHub software modules and its code
Language: C++ - Size: 1.01 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 4 - Forks: 0
braph-software/BRAPH
Brain Analysis using Graph Theory
Language: MATLAB - Size: 5.89 MB - Last synced at: 13 days ago - Pushed at: almost 6 years ago - Stars: 12 - Forks: 2
hochbaumGroup/HNCcorr
HNCcorr algorithm for neuron identification in calcium imaging datasets.
Language: Python - Size: 390 KB - Last synced at: 4 days ago - Pushed at: about 2 years ago - Stars: 12 - Forks: 3
Mark-Kramer/Case-Studies-Python
An introduction to the practicing neuroscientist to data analysis in Python
Language: Jupyter Notebook - Size: 296 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 126 - Forks: 48
jamesrhowe/4FieldAnalysis
A tool for analysis of behavioral data in the 4 quadrant open field olfactory valence test.
Language: R - Size: 825 KB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 0
blixilla/LocareJSON
LocareJSON is a collection of JSON schemas for defining geometrical shapes with coordinates in 3D brain atlas coordinate spaces.
Language: Python - Size: 20.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 1
SchwarzNeuroconLab/DeepLabStream
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
Language: Python - Size: 6.13 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 46 - Forks: 8
sammosummo/Charlie2
Open-source neurocognitive test battery written in Python
Language: Python - Size: 14.5 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 2
mleiwe/TetbowCodes
Codes and figure data used for "Bright multicolor labeling of neuronal circuits with fluorescent proteins and chemical tags" by Sakaguchi et al 2018
Language: MATLAB - Size: 80.1 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 3
Debu922/BCS_Connectome_Project_2020 📦
Summer Project under Brain Cognitive Society, IIT Kanpur
Language: MATLAB - Size: 33 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 4
haiderlab/DP-Lick-Detector
Distribution Package for Dual Port Lick Detector
Size: 14.2 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0
aparek/detoks
Detection of K-complexes and Sleep Spindles (DETOKS) using Sparse Optimization for sleep EEG
Language: MATLAB - Size: 45.9 KB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 4
phildean/SPM_fMRI_Example_Pipeline
Example pipeline for preprocessing, reading in behavioural files, first level and second level analysis
Language: Matlab - Size: 702 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 13 - Forks: 4
phildean/SPM_DiffusionII_Toolbox_BatchScript
Script for running sucbjects through DiffusionII Toolbox in SPM
Language: MATLAB - Size: 29.3 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 1
samnemo/isoitools
C++ tools for calculating cluster quality using information-theoretic measures
Language: C++ - Size: 900 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0
ReWire-LLC/rewire_pulse_oximeter_software_maui
Android software for visualizing pulse oximeter data
Language: C# - Size: 530 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
jajcayn/interactive-spiking-neuron-model
Interactive spiking neuron models
Language: Python - Size: 299 KB - Last synced at: about 2 months ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0
altunenes/Part-Whole 📦
Swap facial landmarks(or whole facial area) for the part-whole task with OpenCV + dlib and MediaPipe.
Language: Python - Size: 16.1 MB - Last synced at: 12 months ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 0
NathanKlineInstitute/OEvent
Neural oscillation event detection and analysis
Language: Python - Size: 353 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 3
bahanonu/imaging_tools
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
Size: 44.9 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 22 - Forks: 1
ethanpirso/CPET
Continuous Psychophysics with Eye Tracking: A MATLAB Based Program for Estimation of Contrast Sensitivity and Assessing Refractive Errors.
Language: MATLAB - Size: 73.2 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
fjkdasilva/craniobot
Language: Python - Size: 39.1 MB - Last synced at: almost 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
nel-lab/mesmerize-napari 📦
Mesmerize plugin for the napari viewer
Language: Python - Size: 36.9 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 0
hasselmonians/pippin
PoInt Process Neuron
Language: MATLAB - Size: 41 KB - Last synced at: 6 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 2
BrainDynamicsUSYD/NeuroPattToolbox Fork of rorygt/NeuroPattToolbox
MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney
Language: MATLAB - Size: 5.64 MB - Last synced at: almost 2 years ago - Pushed at: about 4 years ago - Stars: 10 - Forks: 10
tbrouns/eyestalker
Robust video-based eye tracking using recursive estimation of pupil characteristics
Language: C++ - Size: 1.13 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 50 - Forks: 6
sshen8/acsat
Automated Cell Segmentation by Adaptive Thresholding (ACSAT)
Language: Matlab - Size: 11.7 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 3
jajcayn/pygpso
Gaussian-Processes Surrogate Optimisation in python
Language: Python - Size: 3.09 MB - Last synced at: 10 days ago - Pushed at: almost 4 years ago - Stars: 19 - Forks: 1
IsabHox/nl-DDM
The repository describing, simulating and fitting the nl-DDM to different datasets.
Language: Python - Size: 64.1 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
tbrouns/paser
PASER: Processing and Analysis Schemes for Extracellular Recordings
Language: Matlab - Size: 1010 KB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 3
AminAlam/Dynamics-of-Computational-Neuron-Models
Neural simulations using Brian2 Python Package
Language: Jupyter Notebook - Size: 4.39 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 3
christophe-pouzat/hess-et-al-beta-escin-2019
Data codes and analysis of the added buffer approach with beta-escin perforated patch
Language: HTML - Size: 12.8 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0
Ronit-Desai/Sans-Tracas
An Interactive Cross-Platform tool to run Online EEG Experiments using Web-Bluetooth and the Muse EEG headset.
Language: JavaScript - Size: 48.6 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
jpalma-espinosa/Amaranthus
Cookiecutter template for Computational Scientific Research
Language: HTML - Size: 563 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
ramsys28/ramsys28.github.io
Website of Dr. Manousos Klados
Language: HTML - Size: 44.7 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
soheilbr82/BluegrassWorkingMemory
A setup to evaluate working memory using EEG signals
Language: Python - Size: 362 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 4
ColeLab/ActFlowCategories
Publicly available code for "Distributed network processes account for the majority of variance in localized visual category selectivity", Cocuzza et al., 2022.
Language: Jupyter Notebook - Size: 477 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
mgonzal1/wombats-malos
Framework to model a sensory to action mimetic neural network platform to understand neural information processing
Language: Jupyter Notebook - Size: 8.9 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
thiagoburghi/online-learning
This repository was created with the code used to simulate the adaptive observer from the upcoming paper by Burghi and Sepulchre. Collaborators are invited to experiment with the code and come up with ideas for applications.
Language: Julia - Size: 30.3 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
WriessneggerLab/template-project
A template for research projects.
Language: Jupyter Notebook - Size: 7.81 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
dpshorten/CoTETE.jl
Continuous-Time Event-based Transfer Entropy
Language: Julia - Size: 938 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 4 - Forks: 1
BrainDynamicsUSYD/BrainPalimpsest
Matlab toolbox to deconvolve BOLD-fMRI data. It produces the underlying spatiotemporal neural and hemodynamic activity
Language: MATLAB - Size: 447 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 7 - Forks: 5
UWCCDL/DRI
Delayed Rule Inferral (Delayed vs Prepared control of motor responses)
Language: HTML - Size: 1.15 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
olfa-lab/DmdLib
Python extension to Vialux API allowing projection of random noise patterns
Language: Python - Size: 3.54 MB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 2 - Forks: 2
Animadversio/KeyPointDataPreprocess4DeepLabCut
A short script to re-format the key point coordinate data got from ImageJ (txt) into format (hdf5) required by DeepLabCut to make training dataset.
Language: Jupyter Notebook - Size: 40.4 MB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 0
BrainDynamicsUSYD/hemodynamics-layers
MATLAB codes for simulating spatiotemporal hemodynamic responses across the cortical depth
Language: MATLAB - Size: 17.6 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 1
catetrai/CEST_EVAL_local
CEST-MRI analysis toolbox adapted for Bruker scanners from cest-sources/CEST_EVAL
Language: Matlab - Size: 3.47 MB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 2 - Forks: 2
catetrai/neural-data-analysis
MATLAB tools for analysis and visualization of neural data
Language: Matlab - Size: 8.79 KB - Last synced at: about 2 years ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0
N0AHt/Hydra_CalciumImaging_Analysis
Pipeline for the Automated Analysis of Calcium Imaging Data from Hydra Vulgaris with Single-Cell Resolution
Language: Jupyter Notebook - Size: 84.4 MB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
StefanoBuccelli/bycycle_matlab
Language: MATLAB - Size: 184 MB - Last synced at: about 2 years ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 1
