GitHub topics: motion-correction
thicclatka/CLAH_IA
Suite of Python programs used for 1- and 2-photon calcium imaging analysis
Language: Python - Size: 6.57 MB - Last synced at: about 19 hours ago - Pushed at: about 19 hours ago - Stars: 1 - Forks: 0
flatironinstitute/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Language: Python - Size: 571 MB - Last synced at: 2 days ago - Pushed at: 3 days ago - Stars: 660 - Forks: 380
ENHANCE-PET/FALCON
FALCON is a Python-based software application designed to facilitate PET motion correction, both for head and total-body scans. Our program is built around the fast 'greedy' registration toolkit, which serves as the registration engine. With FALCON, users can enjoy a streamlined experience for implementing motion correction.
Language: Python - Size: 53.2 MB - Last synced at: 17 days ago - Pushed at: 6 months ago - Stars: 40 - Forks: 8
noor-rasel/BgRT-PET-Subsystem
Modelling of BgRT PET susbsystem using GATE Monte Carlo code
Language: Python - Size: 166 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
PennLINC/qsiprep
Preprocessing of diffusion MRI
Language: Python - Size: 178 MB - Last synced at: 21 days ago - Pushed at: about 1 month ago - Stars: 153 - Forks: 58
flatironinstitute/NoRMCorre
Matlab routines for online non-rigid motion correction of calcium imaging data
Language: MATLAB - Size: 74.7 MB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 150 - Forks: 95
lamyj/erwin
Quantitative MRI toolbox in Python
Language: Python - Size: 4.73 MB - Last synced at: 16 days ago - Pushed at: 5 months ago - Stars: 12 - Forks: 0
eyalhana/PCMC-T1
Free-breathing myocardial T1 mapping with Physically-Constrained Motion Correction
Language: Python - Size: 420 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 6 - Forks: 3
TripleCoenzyme/MRI_MotionCorrection
A U-Net based end-to-end MRI motion correction. With/Without GAN version is available.
Language: Python - Size: 11.7 KB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 3
bahanonu/ciatah
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
Language: MATLAB - Size: 52.3 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 82 - Forks: 21
lab-midas/ismrm-moco-workshop
Hands-on examples for motion estimation and correction in MRI
Language: MATLAB - Size: 24 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 29 - Forks: 11
phflot/flow_registration
Flow-Registration toolbox for 2P motion compensation
Language: MATLAB - Size: 4.76 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 21 - Forks: 2
lasopablo/mercure-motionCorr_nii
Server running on AWS (EC2 instance): ANTs Motion Correction template module implemented on Mercure DICOM server
Language: Python - Size: 816 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
thomaskuestner/CS_MoCo_LAB
Compressed Sensing and Motion Correction LAB: An MR acquisition and reconstruction system
Language: MATLAB - Size: 76.5 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 97 - Forks: 49
frankfishburn/TDDR
Temporal Derivative Distribution Repair: A motion correction method for fNIRS
Language: MATLAB - Size: 119 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 10 - Forks: 6
bahanonu/imaging_tools
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
Size: 44.9 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 22 - Forks: 1
emilljungberg/pyMERLIN
Python tools for MERLIN
Language: Python - Size: 4.46 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0
emilljungberg/merlin_mrm
Figures for MERLIN paper and demo of pymerlin
Language: Jupyter Notebook - Size: 2.27 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
sxg/Register
An Electron app to register medical images using BROCCOLI
Language: JavaScript - Size: 2.1 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
shih-liang/CaImAn-pkgbuild
PKGBUILD of CaImAn for Archlinux
Language: Shell - Size: 13.7 KB - Last synced at: about 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
