Topic: "chip-seq-pipelines"
kundajelab/chipseq_pipeline
AQUAS TF and histone ChIP-seq pipeline
Language: Java - Size: 1.51 MB - Last synced at: 6 months ago - Pushed at: almost 3 years ago - Stars: 105 - Forks: 40
KoesGroup/Snakemake_ChIPseq_PE
Pipeline for the analysis of PE ChIP-seq data
Language: Python - Size: 20.8 MB - Last synced at: 6 days ago - Pushed at: almost 5 years ago - Stars: 14 - Forks: 4
RenneLab/CnR-flow
CUT&RUN-Flow, A Nextflow pipeline for QC, tag trimming, normalization, and peak calling for data from CUT&RUN experiments.
Language: Nextflow - Size: 23.7 MB - Last synced at: about 2 months ago - Pushed at: about 3 years ago - Stars: 5 - Forks: 4
elsasserlab/minute
MINUTE-ChIP data analysis workflow
Language: Python - Size: 5.17 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0
mgildea87/ChIPseq
Paired-end ChIPseq data processing workflow designed for execution on the BigPurple HPC. Primary software used: FastQC, Fastp, Bowtie 2, MACS2, MultiQC
Language: Python - Size: 19.5 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
metamaden/seq_answers
Sequencing data preprocessing
Language: R - Size: 1.44 MB - Last synced at: 11 months ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
