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GitHub / krassowski / meningitis-integration
Discovering biomarkers for meningitis by multivariate integration of multi-omics and clinical data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/krassowski%2Fmeningitis-integration
Stars: 0
Forks: 1
Open Issues: 7
License: mit
Language: Jupyter Notebook
Repo Size: 103 MB
Dependencies:
23
Created: about 5 years ago
Updated: almost 4 years ago
Last pushed: almost 2 years ago
Last synced: about 1 month ago
Topics: meningitis, omics, omics-data-integration, proteomics, transcriptomics
Funding links: https://github.com/sponsors/krassowski
Files
Dependencies
- jupyter-git * development
- nbdime * development
- enhanced_multiprocessing ==1.0
- goatools ==0.8.12
- gsea_api ==0.3.2
- inflection ==0.3.1
- ipython ==7.13.0
- jupyter-helpers ==0.1.1
- jupyterlab ==2.1.0
- matplotlib ==3.2.0
- nbimporter ==0.3.2
- nbpipeline ==0.2.7
- numpy ==1.18.1
- pandas ==1.0.1
- pydantic ==1.4
- pyensembl ==1.8.5
- rpy2 ==3.2.6
- scikit-gof ==0.1.3
- scikit-learn ==0.22.1
- scipy ==1.4.1
- tqdm ==4.43.0
- tzlocal ==2.0.0
- xlrd ==1.2.0