GitHub topics: biostrings
carlosagalicia/SARS-CoV-2-Sequence-Analysis
The project explores genetic similarities and differences between SARS-CoV-2 variants, focusing on their distribution across Asian, Hispanic, European, and African populations.
Size: 398 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
carlosagalicia/SARS-CoV-2-Variant-Analysis
The project includes data visualization, variant sequence analysis, and a report detailing the spread and characteristics of COVID-19 variants worldwide.
Size: 753 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
rainbowmycelium/ConSequences
R script for GenBank sequences names changing, filling-in missing molecular markers data and sequences concatenation
Language: R - Size: 24.4 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
Amirreza-Mousavi/Protein_Normalized_SW_Similarity_Score
An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.
Language: R - Size: 8.35 MB - Last synced at: 7 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
FelixErnst/Modstrings
:package: Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
Language: R - Size: 681 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1
stupornova33/BSGenome.Dsimulans.NCBI.3.1.fa
Drosophila simulans genome package forged for BSgenome
Language: HTML - Size: 29.1 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
stupornova33/BSgenome.Dmauritania
Drosophila mauritania genome package forged with BSgenome
Language: R - Size: 32.9 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
Amirreza-Mousavi/Pairwise_Sequence_Alignment_Speed_Test
An R script to measure the potential influence of different parameters that could have affected the speed of pairwise sequence alignment, using the functions of the Biostrings package.
Language: R - Size: 24.4 KB - Last synced at: 7 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0