GitHub topics: brain-extraction
Macatools/macapype
PNH segmentation pipelines based on nipype
Language: Python - Size: 71.5 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 22 - Forks: 13
BrainLesion/preprocessing
preprocessing tools for multi-modal 3D brain MRI
Language: C - Size: 1.18 GB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 18 - Forks: 6
wwu-mmll/deepbet
Fast brain extraction using neural networks
Language: Python - Size: 28.1 MB - Last synced at: 15 days ago - Pushed at: 9 months ago - Stars: 30 - Forks: 3
wwu-mmll/deepmriprep
Neural network-based MRI preprocessing: Prep š§ images in seconds š„
Language: Python - Size: 199 MB - Last synced at: 14 days ago - Pushed at: 4 months ago - Stars: 31 - Forks: 0
vanandrew/brainextractor
A re-implementation of FSL's Brain Extraction Tool in Python
Language: Python - Size: 43 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 40 - Forks: 4
jcreinhold/pyrobex
python bindings for ROBEX brain extraction
Language: Python - Size: 47.8 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 1
npnl/PALS
Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis and ensure quality in stroke research using T1-weighted MRIs
Language: Python - Size: 113 MB - Last synced at: about 2 months ago - Pushed at: 5 months ago - Stars: 23 - Forks: 7
neuronets/brainy
Automated brain segmentation
Language: Python - Size: 2.54 MB - Last synced at: about 2 months ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0
Computational-Imaging-LAB/MIPA-Stroke
Language: Jupyter Notebook - Size: 911 KB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0
jlohmeier/atlasBREX
atlasBREX: Automated averaged template-derived brain extraction in animal MRI
Language: Shell - Size: 11.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 2
WuChanada/StripSkullCT
Extract brain and remove skulls from brain CT and CTA images
Language: MATLAB - Size: 5.13 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 22 - Forks: 7
mu40/fetal-align
Rapid headāpose detection for automated slice prescription of fetalābrain MRI
Language: MATLAB - Size: 48.1 MB - Last synced at: 17 days ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 1
andreped/neukit
:hugs: neukit: web application for automatic brain extraction and preoperative tumor segmentation from MRI
Language: Python - Size: 60.5 KB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1
sjyothul/supervised-machine-learning-to-classify-the-IC-images-of-rs-fMRI-scans-as-RSN
we will use supervised learning techniques to classify the independent component (IC) images of resting state functional magnetic resonance imaging (rs-fMRI) scans as Noise and Resting state network (RSN)
Language: Python - Size: 9.77 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
sjyothul/clustering-technique-to-detect-number-of-clusters-in-brain-slices-of-rs-fmri-scans
we will apply clustering techniques to detect the number of clusters in the extracted brain slices of resting state functional magnetic resonance imaging (rs-fMRI) scans
Language: Python - Size: 4.88 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
sjyothul/extracting-brain-boundaries-from-rs-fMRI-data
we will extract the brain boundaries from the resting state functional magnetic resonance imaging (rs-fMRI) scans
Language: Python - Size: 4.88 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
CBICA/BrainMaGe
Brain extraction in presence of abnormalities, using single and multiple MRI modalities
Language: Python - Size: 2.34 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 26 - Forks: 7
aghaeifar/bet2 Fork of liangfu/bet2
MATLAB mex interface and Python wrapper for standalone Brain Extraction Tool (bet2),
Language: C++ - Size: 897 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
