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GitHub topics: colabfold

OtoYuki/proteus

Proteus: A Django-based web application for a semi-automated computational pipeline in synthetic protein design, integrating ColabFold, GROMACS, and ML ranking.

Language: JavaScript - Size: 2.8 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 0 - Forks: 0

soedinglab/MMseqs2-App

MMseqs2 app to run on your workstation or servers

Language: Vue - Size: 10.5 MB - Last synced at: 9 days ago - Pushed at: 24 days ago - Stars: 80 - Forks: 26

nf-core/proteinfold

Protein 3D structure prediction pipeline

Language: Nextflow - Size: 8.11 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 80 - Forks: 57

suzuki-2001/adaptyv-protein-comp

Design data and process for the AdaptyvBio protein design competition

Language: Python - Size: 3.55 MB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 10 - Forks: 2

srom/afpd

AlphaFold pulldown implementation adapted from https://github.com/KosinskiLab/AlphaPulldown

Language: Jupyter Notebook - Size: 2.52 MB - Last synced at: 16 days ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

chemicalglycobiologylab/Alphafold-multimer---scripts

This is a collection of script for analysing Alphafold multimer results during highthroughput screening using Colabfold or simialr packages.

Size: 1000 Bytes - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

huiwenke/MineProt

Stand-alone server for structural proteome curation

Language: PHP - Size: 5.97 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 6 - Forks: 0

hds-sandbox/AlphaFold_Workshop

Predict protein folding structures using ColabFold. Gain a deeper understanding of protein folding prediction with AlphaFold2 and MMseqs2. Run the Jupyter notebook on UCloud, learn to interpret results, predict protein structures of interest. Technical requirements provided. Enhance your knowledge of protein folding and AlphaFold2's principles. Fam

Language: Jupyter Notebook - Size: 567 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

Related Keywords
colabfold 8 alphafold 4 bioinformatics 3 alphafold2 3 protein-structure 3 alphafold-multimer 2 protein-design 2 docker 2 computational-biology 2 protein-folding 1 protein-sequences 1 protein-fold-prediction 1 workflow 1 adaptyvbio 1 denovo-design 1 esm 1 pipeline 1 ai-drug-discovery 1 alphapulldown 1 deepmind 1 protein-protein-interaction 1 protein 1 server 1 deep-learning 1 jupyter-notebook 1 mmseqs2 1 protein-folding-prediction 1 protein-structure-prediction 1 ucloud 1 celery 1 django 1 gromacs 1 machine-learning 1 molecular-dynamics 1 protein-engineering 1 python 1 scientific-computing 1 synthetic-biology 1 web-application 1 docker-compose 1 electron 1 foldseek 1 golang 1 mmseqs 1 profile-search 1 sequence-search 1 structure-search 1 vue 1 esmfold 1 nextflow 1 nf-core 1