GitHub topics: sequence-search
soedinglab/MMseqs2-App
MMseqs2 app to run on your workstation or servers
Language: Vue - Size: 10.8 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 76 - Forks: 25
shenwei356/LexicMap
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
Language: Go - Size: 43.8 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 140 - Forks: 4
soedinglab/MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
Language: C - Size: 30.9 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 1,617 - Forks: 218
rcedgar/muscle
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Language: C++ - Size: 67.8 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 240 - Forks: 25
soedinglab/hh-suite
Remote protein homology detection suite.
Language: C - Size: 22.9 MB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 568 - Forks: 139
proteinevolution/Toolkit
The MPI Bioinformatics Toolkit
Language: Scala - Size: 47.8 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 65 - Forks: 15
itoshkov/multi-search
Multi-search Java library
Language: Java - Size: 42 KB - Last synced at: 5 days ago - Pushed at: 25 days ago - Stars: 0 - Forks: 0
Kingsford-Group/kourami
Kourami: Graph-guided assembly for HLA alleles
Language: Java - Size: 19.2 MB - Last synced at: 7 months ago - Pushed at: almost 6 years ago - Stars: 35 - Forks: 12
Abdelrahman-Hussain/sequenceSet Fork of AhmedOsama93/sequenceSet
implement Sequence setof the Btree.
Size: 413 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
ggirelli/seq-lib-gg 📦
Base librarys for sequencing data analysis.
Language: R - Size: 7.81 KB - Last synced at: about 2 years ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0
krzjoa/sciquence
Time series & sequence processing in Python ðŸ—
Language: Python - Size: 903 KB - Last synced at: 10 days ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 2
TravisWheelerLab/bagel
A framework for benchmarking sequence search tools
Language: Python - Size: 797 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
